Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC126121.1-201ENST00000482313 553 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 RPS12P31-201ENST00000491419 398 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC025918.2-201ENST00000558683 763 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC124283.4-201ENST00000581815 456 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC124856.1-201ENST00000600819 896 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 AL133507.1-201ENST00000605269 557 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC018638.7-201ENST00000605836 1114 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 PART1_2.1-201ENST00000612397 250 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 AP000676.3-201ENST00000623299 569 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 LINC01739-205ENST00000641890 573 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.56□□□□□ -1.52
CACNA2D1P54289 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CACNA2D1P54289 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CACNA2D1P54289 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AL031595.2-201ENST00000624215 19071 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 SNORA17.1-201ENST00000362945 126 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 SNORA70-201ENST00000384436 135 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 SNORD116-4-201ENST00000384733 96 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 MIR765-201ENST00000390226 114 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 U3.36-201ENST00000408418 213 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 RNU4-22P-201ENST00000411058 166 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 RN7SKP126-201ENST00000411143 300 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 NPM1P40-201ENST00000412758 733 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 QRSL1P2-201ENST00000418582 964 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 PSMD10P3-201ENST00000437000 448 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC092647.2-201ENST00000452998 253 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC090114.3-201ENST00000479267 829 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 RPL32P9-201ENST00000487963 407 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 HMGB1P3-201ENST00000502802 616 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 SNRPCP2-201ENST00000504370 475 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC110775.1-201ENST00000513721 462 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC067904.2-201ENST00000517322 1283 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 BUD31P1-201ENST00000521828 359 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 LRRC6P1-201ENST00000532188 885 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AP003717.3-201ENST00000544832 1180 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 MIR4472-2-201ENST00000582069 67 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC008814.1-201ENST00000603797 406 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 AL162431.4-201ENST00000604674 411 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 TAS2R6P-201ENST00000605022 826 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC211433.2-201ENST00000608433 387 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CACNA2D1P54289 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CACNA2D1P54289 AC092111.2-201ENST00000611627 1414 ntBASIC5.55□□□□□ -1.52
CACNA2D1P54289 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms