Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.21□□□□□ -1.42
CLTCL1P53675 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.21□□□□□ -1.42
CLTCL1P53675 Z95327.1-201ENST00000446082 482 ntBASIC6.21□□□□□ -1.42
CLTCL1P53675 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.21□□□□□ -1.42
CLTCL1P53675 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.21□□□□□ -1.42
CLTCL1P53675 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.21□□□□□ -1.42
CLTCL1P53675 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.21□□□□□ -1.42
CLTCL1P53675 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.21□□□□□ -1.42
CLTCL1P53675 COX6CP4-201ENST00000605798 228 ntBASIC6.21□□□□□ -1.42
CLTCL1P53675 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLTCL1P53675 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLTCL1P53675 AC000374.1-201ENST00000434698 1745 ntBASIC6.21□□□□□ -1.42
CLTCL1P53675 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.2□□□□□ -1.42
CLTCL1P53675 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLTCL1P53675 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLTCL1P53675 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLTCL1P53675 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.2□□□□□ -1.42
CLTCL1P53675 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CLTCL1P53675 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.2□□□□□ -1.42
CLTCL1P53675 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.2□□□□□ -1.42
CLTCL1P53675 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLTCL1P53675 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLTCL1P53675 AL356968.2-201ENST00000412769 1257 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.2□□□□□ -1.42
CLTCL1P53675 RPS20P4-201ENST00000461659 355 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 AC108145.1-201ENST00000503770 153 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 ATP1B1P1-201ENST00000509767 915 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLTCL1P53675 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.2□□□□□ -1.42
CLTCL1P53675 MIR4286-201ENST00000580651 93 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 RNU4-89P-201ENST00000607443 133 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.2□□□□□ -1.42
CLTCL1P53675 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.2□□□□□ -1.42
CLTCL1P53675 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLTCL1P53675 TMEM30CP-203ENST00000637814 1035 ntBASIC6.2□□□□□ -1.42
CLTCL1P53675 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.2□□□□□ -1.42
CLTCL1P53675 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CLTCL1P53675 AP002512.4-202ENST00000641599 4530 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 AP001157.1-201ENST00000550837 2339 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CLTCL1P53675 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 AL122126.1-201ENST00000546905 1318 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 RN7SKP186-201ENST00000365371 303 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.19□□□□□ -1.42
CLTCL1P53675 RNA5SP143-201ENST00000516936 115 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 AC034105.4-201ENST00000568304 277 ntBASIC6.19□□□□□ -1.42
CLTCL1P53675 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.19□□□□□ -1.42
CLTCL1P53675 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.19□□□□□ -1.42
CLTCL1P53675 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.19□□□□□ -1.42
CLTCL1P53675 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CLTCL1P53675 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.19□□□□□ -1.42
CLTCL1P53675 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.19□□□□□ -1.42
CLTCL1P53675 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLTCL1P53675 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLTCL1P53675 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CLTCL1P53675 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLTCL1P53675 AL117339.2-201ENST00000430475 180 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 AL512326.1-201ENST00000443050 721 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.18□□□□□ -1.42
CLTCL1P53675 AC022034.3-201ENST00000471393 478 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 AF213884.1-201ENST00000488102 463 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 AP002812.1-201ENST00000495378 474 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.18□□□□□ -1.42
CLTCL1P53675 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.18□□□□□ -1.42
CLTCL1P53675 AL353726.1-201ENST00000614041 1000 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLTCL1P53675 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CLTCL1P53675 AC112200.1-201ENST00000625015 234 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLTCL1P53675 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLTCL1P53675 MAPK10-372ENST00000641954 3413 ntBASIC6.18□□□□□ -1.42
CLTCL1P53675 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLTCL1P53675 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLTCL1P53675 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.18□□□□□ -1.42
CLTCL1P53675 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CLTCL1P53675 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLTCL1P53675 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 AL691449.1-201ENST00000426570 421 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 ATP5G1P3-201ENST00000463301 410 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 RNA5SP497-201ENST00000516081 97 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 RNU1-45P-201ENST00000517191 141 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 MIR8069-1-201ENST00000616627 86 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 AC006133.1-201ENST00000617106 264 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 MIR8069-2-201ENST00000621412 86 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 AC039056.2-201ENST00000622261 511 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
CLTCL1P53675 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CLTCL1P53675 AC027228.2-201ENST00000567141 2154 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
CLTCL1P53675 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 AC005261.2-201ENST00000593427 4258 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLTCL1P53675 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms