Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDE6CP51160 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PDE6CP51160 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDE6CP51160 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDE6CP51160 AL121950.1-201ENST00000624993 2077 ntBASIC5.68□□□□□ -1.5
PDE6CP51160 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.68□□□□□ -1.5
PDE6CP51160 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDE6CP51160 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 NXF4-202ENST00000416098 1465 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 MIR105-1-201ENST00000385222 81 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AL034403.1-201ENST00000399414 885 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AL136131.1-201ENST00000406079 803 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.67□□□□□ -1.5
PDE6CP51160 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 RPL35AP24-201ENST00000413846 330 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 AL449283.1-202ENST00000418249 604 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 AL096803.2-201ENST00000450032 677 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC104634.1-201ENST00000452720 462 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 RPL7P41-201ENST00000485823 957 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 UBA52P7-201ENST00000486088 380 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC023424.1-201ENST00000496058 459 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC072052.1-201ENST00000496556 306 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 HMGN2P6-201ENST00000551091 273 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 RN7SL622P-201ENST00000585292 275 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.67□□□□□ -1.5
PDE6CP51160 AC002487.1-201ENST00000604565 994 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC009948.4-201ENST00000604692 675 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AL021707.7-201ENST00000607991 416 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 RPSAP73-201ENST00000614820 330 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDE6CP51160 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDE6CP51160 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.67□□□□□ -1.5
PDE6CP51160 AL355578.1-201ENST00000607405 1328 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC023421.1-201ENST00000590535 1785 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 AC104623.2-202ENST00000623477 4002 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 AL034549.2-201ENST00000618285 3373 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 CASC19-281ENST00000642118 1554 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDE6CP51160 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
PDE6CP51160 SPATA2P1-201ENST00000431223 2055 ntBASIC5.67□□□□□ -1.5
PDE6CP51160 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDE6CP51160 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDE6CP51160 RNU5B-1-201ENST00000363286 116 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 RNU4-40P-201ENST00000364351 143 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDE6CP51160 RNU1-149P-201ENST00000390870 161 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 OR4K12P-201ENST00000406538 961 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
PDE6CP51160 RNA5SP296-201ENST00000410523 111 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 RN7SKP213-201ENST00000410746 298 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.66□□□□□ -1.5
PDE6CP51160 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.66□□□□□ -1.5
PDE6CP51160 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.66□□□□□ -1.5
PDE6CP51160 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.66□□□□□ -1.5
PDE6CP51160 AP000936.3-201ENST00000438127 255 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC000041.1-201ENST00000439655 175 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC092473.1-201ENST00000441098 221 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.66□□□□□ -1.5
PDE6CP51160 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.66□□□□□ -1.5
PDE6CP51160 HMGB1P5-202ENST00000451497 985 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 DNAJB5P1-201ENST00000454004 806 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.66□□□□□ -1.5
PDE6CP51160 RPL7P40-201ENST00000481703 745 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 RN7SL814P-201ENST00000487715 300 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.66□□□□□ -1.5
PDE6CP51160 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.66□□□□□ -1.5
PDE6CP51160 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.66□□□□□ -1.5
PDE6CP51160 AC016559.2-201ENST00000510759 359 ntBASIC5.66□□□□□ -1.5
PDE6CP51160 AC093752.1-206ENST00000511823 336 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms