Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.07□□□□□ -1.6
SSR1P43307 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 AC008549.2-201ENST00000333482 706 ntBASIC5.07□□□□□ -1.6
SSR1P43307 RNU4-4P-201ENST00000364588 130 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.07□□□□□ -1.6
SSR1P43307 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.07□□□□□ -1.6
SSR1P43307 NFYAP1-201ENST00000431953 972 ntBASIC5.07□□□□□ -1.6
SSR1P43307 RPL7P28-201ENST00000437739 740 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 EEF1B2P5-201ENST00000444820 548 ntBASIC5.07□□□□□ -1.6
SSR1P43307 RPL7P31-201ENST00000450192 724 ntBASIC5.07□□□□□ -1.6
SSR1P43307 OTX2P1-201ENST00000450956 354 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AC234781.3-201ENST00000452540 973 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AC005008.1-201ENST00000456151 612 ntBASIC5.07□□□□□ -1.6
SSR1P43307 BX284632.1-201ENST00000478218 541 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AC106872.2-201ENST00000494303 480 ntBASIC5.07□□□□□ -1.6
SSR1P43307 MRPS33P2-201ENST00000507850 322 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.07□□□□□ -1.6
SSR1P43307 AC013701.1-201ENST00000522657 465 ntBASIC5.07□□□□□ -1.6
SSR1P43307 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.07□□□□□ -1.6
SSR1P43307 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.07□□□□□ -1.6
SSR1P43307 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.07□□□□□ -1.6
SSR1P43307 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.07□□□□□ -1.6
SSR1P43307 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSR1P43307 VN1R79P-201ENST00000593540 513 ntBASIC5.07□□□□□ -1.6
SSR1P43307 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSR1P43307 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.07□□□□□ -1.6
SSR1P43307 AC009452.1-201ENST00000640823 606 ntBASIC5.07□□□□□ -1.6
SSR1P43307 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSR1P43307 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSR1P43307 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 AL592291.1-201ENST00000403830 352 ntBASIC5.06□□□□□ -1.6
SSR1P43307 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.06□□□□□ -1.6
SSR1P43307 RPS17P8-201ENST00000434525 335 ntBASIC5.06□□□□□ -1.6
SSR1P43307 MTCO3P17-201ENST00000443775 513 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC073850.1-201ENST00000449243 255 ntBASIC5.06□□□□□ -1.6
SSR1P43307 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.06□□□□□ -1.6
SSR1P43307 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.06□□□□□ -1.6
SSR1P43307 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 AC105918.1-201ENST00000474399 838 ntBASIC5.06□□□□□ -1.6
SSR1P43307 RPSAP50-201ENST00000481955 852 ntBASIC5.06□□□□□ -1.6
SSR1P43307 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC006499.3-201ENST00000506077 748 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.06□□□□□ -1.6
SSR1P43307 SNORD116-26-201ENST00000516006 96 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.06□□□□□ -1.6
SSR1P43307 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.06□□□□□ -1.6
SSR1P43307 OR5AZ1P-201ENST00000527448 943 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSR1P43307 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.06□□□□□ -1.6
SSR1P43307 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.06□□□□□ -1.6
SSR1P43307 AC090953.1-201ENST00000604305 1092 ntBASIC5.06□□□□□ -1.6
SSR1P43307 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.06□□□□□ -1.6
SSR1P43307 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 MIR6886-201ENST00000619864 61 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AC055839.1-201ENST00000634467 498 ntBASIC5.06□□□□□ -1.6
SSR1P43307 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.06□□□□□ -1.6
SSR1P43307 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.06□□□□□ -1.6
SSR1P43307 AC053481.2-202ENST00000582394 1500 ntBASIC5.06□□□□□ -1.6
SSR1P43307 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.06□□□□□ -1.6
SSR1P43307 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.06□□□□□ -1.6
SSR1P43307 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSR1P43307 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SSR1P43307 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.05□□□□□ -1.6
SSR1P43307 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.05□□□□□ -1.6
SSR1P43307 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSR1P43307 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 XIAPP3-201ENST00000312918 795 ntBASIC5.05□□□□□ -1.6
SSR1P43307 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSR1P43307 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 AL080315.1-201ENST00000406055 466 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 GTF2IP5-201ENST00000414608 731 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 RPL7P53-201ENST00000421245 739 ntBASIC5.05□□□□□ -1.6
SSR1P43307 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 AL138785.1-201ENST00000425821 331 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 SKP1P3-201ENST00000429280 487 ntBASIC5.05□□□□□ -1.6
SSR1P43307 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 NMNAT1P2-201ENST00000435192 860 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms