Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 MTCO1P11-201ENST00000429111 1528 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 RNU6-673P-201ENST00000365084 104 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 MIR223-201ENST00000385204 110 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 MIR1286-201ENST00000408112 78 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 OR6K4P-201ENST00000423179 955 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 RPL7P31-201ENST00000450192 724 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 HMGB3P21-201ENST00000452483 547 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC018638.3-201ENST00000461273 132 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC105918.1-201ENST00000474399 838 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.17□□□□□ -1.74
CD40LGP29965 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 RNU6-347P-201ENST00000516658 105 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 UBTFL9-201ENST00000534504 1148 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.17□□□□□ -1.74
CD40LGP29965 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40LGP29965 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CD40LGP29965 MIR4716-201ENST00000579628 84 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC019131.2-201ENST00000609071 870 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AP000864.1-201ENST00000609424 650 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC007204.2-201ENST00000615022 616 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AL138721.1-201ENST00000616756 179 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CD40LGP29965 AC243960.7-201ENST00000623532 707 ntBASIC4.17□□□□□ -1.74
CD40LGP29965 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40LGP29965 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40LGP29965 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40LGP29965 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CD40LGP29965 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 RNA5SP234-201ENST00000363916 119 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 RNU6-304P-201ENST00000364855 107 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 MIR600-201ENST00000385007 98 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AL390774.1-201ENST00000411924 246 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 TRIM60P17-201ENST00000415181 719 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40LGP29965 AL391219.1-201ENST00000422570 483 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC073335.1-201ENST00000427776 363 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 MTCO3P21-201ENST00000430791 643 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 CFL1P1-202ENST00000432948 411 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40LGP29965 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 RNU6-1218P-201ENST00000458990 108 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 RPS4XP20-201ENST00000505751 772 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 SCARNA21.2-201ENST00000516600 166 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 BUD31P1-201ENST00000521828 359 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 SMARCE1P4-201ENST00000523647 241 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC107016.1-201ENST00000550463 337 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40LGP29965 FKBP1AP1-201ENST00000594588 318 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 SUMO2P15-201ENST00000604285 278 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AL512329.2-201ENST00000607350 548 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 OR6R2P-201ENST00000609216 300 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC009318.3-201ENST00000616916 503 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40LGP29965 AL035461.2-201ENST00000619201 524 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AC233309.1-201ENST00000619522 751 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 AP002505.2-201ENST00000623585 696 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40LGP29965 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms