Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HMGB3P13-201ENST00000511263 607 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 ATP5LP3-201ENST00000514223 304 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 RNU1-6P-201ENST00000516290 144 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 BUD31P1-201ENST00000521828 359 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
UBCP0CG48 AC090819.1-201ENST00000523800 1111 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.15□□□□□ -1.75
UBCP0CG48 CYCSP28-201ENST00000534284 321 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.15□□□□□ -1.75
UBCP0CG48 HMGB2P1-201ENST00000591146 634 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 AP001521.2-201ENST00000608772 546 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 AC015813.4-201ENST00000610469 179 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 EOGT-210ENST00000615922 1931 ntBASIC4.15□□□□□ -1.75
UBCP0CG48 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBCP0CG48 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UBCP0CG48 OR56B2P-201ENST00000317102 954 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.14□□□□□ -1.75
UBCP0CG48 Z74021.1-201ENST00000423610 407 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 CHEK2P5-201ENST00000423877 246 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC005033.1-201ENST00000428904 813 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 RPL7P11-201ENST00000437586 658 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 VN1R48P-201ENST00000448149 1036 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.14□□□□□ -1.75
UBCP0CG48 AURKAPS1-201ENST00000451805 1212 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 IFNWP4-201ENST00000453148 294 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.14□□□□□ -1.75
UBCP0CG48 RPL23AP56-201ENST00000460778 453 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC108022.1-201ENST00000493466 478 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC140172.1-201ENST00000502928 141 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.14□□□□□ -1.75
UBCP0CG48 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 HIGD1AP14-201ENST00000507617 282 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC004980.4-201ENST00000513375 203 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 RNA5SP392-201ENST00000516905 112 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 VTA1P2-201ENST00000520205 911 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC090888.3-201ENST00000558917 509 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC007225.2-201ENST00000562529 256 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC093249.4-201ENST00000564755 259 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 RN7SL802P-201ENST00000577858 299 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 SLC25A36P1-201ENST00000590111 465 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AC011445.2-201ENST00000599274 173 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC005520.3-201ENST00000602874 370 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AP000864.1-201ENST00000609424 650 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 EIF3FP1-201ENST00000613970 806 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.14□□□□□ -1.75
UBCP0CG48 AL359757.1-201ENST00000623176 255 ntBASIC4.14□□□□□ -1.75
UBCP0CG48 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
UBCP0CG48 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBCP0CG48 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.14□□□□□ -1.75
UBCP0CG48 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.13□□□□□ -1.75
UBCP0CG48 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 AL672167.1-203ENST00000641299 2975 ntBASIC4.13□□□□□ -1.75
UBCP0CG48 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 AP001002.1-201ENST00000625148 1513 ntBASIC4.13□□□□□ -1.75
UBCP0CG48 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
UBCP0CG48 ST13P16-201ENST00000401760 781 ntBASIC4.13□□□□□ -1.75
UBCP0CG48 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 GJA6P-201ENST00000415117 1042 ntBASIC4.13□□□□□ -1.75
UBCP0CG48 AJ239321.1-201ENST00000424255 564 ntBASIC4.13□□□□□ -1.75
UBCP0CG48 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBCP0CG48 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
UBCP0CG48 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.13□□□□□ -1.75
UBCP0CG48 CNOT7P2-201ENST00000441051 832 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms