Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 AL645937.3-201ENST00000453647 936 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 BX323845.2-201ENST00000458382 234 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC104339.1-201ENST00000465478 348 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC023194.1-201ENST00000493084 308 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 AC008629.2-201ENST00000503783 483 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 PPIAP6-201ENST00000557078 499 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 HSPE1P3-201ENST00000559254 309 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC107954.1-201ENST00000565906 727 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC015801.1-201ENST00000585651 153 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC115085.1-201ENST00000588924 229 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC007621.1-201ENST00000604544 437 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 MIR98-201ENST00000606724 119 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC093788.1-201ENST00000609356 927 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 Z95327.3-201ENST00000610385 572 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 uc_338.29-201ENST00000615099 168 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC073862.4-201ENST00000622982 854 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC034229.2-201ENST00000566945 2508 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 AP002907.1-201ENST00000606361 1430 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC097504.1-201ENST00000515103 2415 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFAP04085 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFAP04085 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 PPIAP22-201ENST00000358455 498 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RNA5SP308-201ENST00000362532 115 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RN7SKP107-201ENST00000364157 290 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RN7SKP189-201ENST00000365042 330 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RPS20P2-201ENST00000402520 389 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RN7SKP254-201ENST00000410685 310 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RSU1P3-201ENST00000412878 835 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AC007390.1-201ENST00000415722 356 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AC008280.1-201ENST00000418851 412 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 USP9YP20-201ENST00000419224 558 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 RPL7P57-201ENST00000423238 740 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 ACTR3P2-201ENST00000439585 1257 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC245291.3-201ENST00000443400 292 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 AL035551.1-201ENST00000446931 348 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AL121578.2-201ENST00000448797 447 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC090142.1-201ENST00000465776 462 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC114967.1-201ENST00000504890 259 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RN7SKP70-201ENST00000516655 271 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 RNU6-1153P-201ENST00000516760 105 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 Y_RNA.701-201ENST00000516812 110 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFAP04085 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 MIR4732-201ENST00000581873 76 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms