Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
LDLRP01130 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
LDLRP01130 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.92□□□□□ -1.62
LDLRP01130 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 AC132825.1-201ENST00000463573 2247 ntBASIC4.92□□□□□ -1.62
LDLRP01130 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LDLRP01130 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LDLRP01130 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LDLRP01130 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.91□□□□□ -1.62
LDLRP01130 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LDLRP01130 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.91□□□□□ -1.62
LDLRP01130 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LDLRP01130 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
LDLRP01130 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.91□□□□□ -1.62
LDLRP01130 HSPE1P16-201ENST00000426640 348 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.91□□□□□ -1.62
LDLRP01130 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.91□□□□□ -1.62
LDLRP01130 RPL23AP23-201ENST00000452590 471 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC009963.2-201ENST00000453431 138 ntBASIC4.91□□□□□ -1.62
LDLRP01130 RN7SL189P-201ENST00000468631 289 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC092324.1-201ENST00000468671 324 ntBASIC4.91□□□□□ -1.62
LDLRP01130 NPM1P17-201ENST00000479221 602 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC090114.3-201ENST00000479267 829 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC010460.2-201ENST00000509054 677 ntBASIC4.91□□□□□ -1.62
LDLRP01130 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.91□□□□□ -1.62
LDLRP01130 SCARNA16.4-201ENST00000516956 187 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.91□□□□□ -1.62
LDLRP01130 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.91□□□□□ -1.62
LDLRP01130 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.91□□□□□ -1.62
LDLRP01130 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LDLRP01130 AC092490.3-201ENST00000545370 572 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC087888.1-201ENST00000550884 1254 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC063949.1-201ENST00000552900 865 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AC023158.1-201ENST00000561632 1025 ntBASIC4.91□□□□□ -1.62
LDLRP01130 DPRXP4-201ENST00000578053 568 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AP005262.1-201ENST00000582646 997 ntBASIC4.91□□□□□ -1.62
LDLRP01130 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 AC069307.1-201ENST00000602820 447 ntBASIC4.91□□□□□ -1.62
LDLRP01130 AP000346.3-201ENST00000622821 210 ntBASIC4.91□□□□□ -1.62
LDLRP01130 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 AL627171.1-201ENST00000618845 1308 ntBASIC4.91□□□□□ -1.62
LDLRP01130 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
LDLRP01130 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDLRP01130 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.91□□□□□ -1.62
LDLRP01130 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LDLRP01130 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.9□□□□□ -1.62
LDLRP01130 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
LDLRP01130 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
LDLRP01130 RNU4-44P-201ENST00000363050 141 ntBASIC4.9□□□□□ -1.63
LDLRP01130 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.9□□□□□ -1.63
LDLRP01130 SNORA51.8-201ENST00000384234 132 ntBASIC4.9□□□□□ -1.63
LDLRP01130 MIR192-201ENST00000384915 110 ntBASIC4.9□□□□□ -1.63
LDLRP01130 MT-TP-201ENST00000387461 68 ntBASIC4.9□□□□□ -1.63
LDLRP01130 TAF9BP2-201ENST00000400856 499 ntBASIC4.9□□□□□ -1.63
LDLRP01130 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
LDLRP01130 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC069282.1-201ENST00000411911 526 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC093655.2-201ENST00000425735 631 ntBASIC4.9□□□□□ -1.63
LDLRP01130 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 MRPL50P1-201ENST00000431951 384 ntBASIC4.9□□□□□ -1.63
LDLRP01130 RNFT1P2-201ENST00000443064 757 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 RN7SL481P-201ENST00000477764 299 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.9□□□□□ -1.63
LDLRP01130 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.9□□□□□ -1.63
LDLRP01130 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.9□□□□□ -1.63
LDLRP01130 RN7SKP46-201ENST00000515942 234 ntBASIC4.9□□□□□ -1.63
LDLRP01130 RNU6-941P-201ENST00000516346 108 ntBASIC4.9□□□□□ -1.63
LDLRP01130 RN7SKP147-201ENST00000517154 244 ntBASIC4.9□□□□□ -1.63
LDLRP01130 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.9□□□□□ -1.63
LDLRP01130 HMGB1P40-201ENST00000525121 540 ntBASIC4.9□□□□□ -1.63
LDLRP01130 MTND5P21-201ENST00000531961 522 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC025918.2-201ENST00000558683 763 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.9□□□□□ -1.63
LDLRP01130 AC021483.2-201ENST00000567415 758 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.9□□□□□ -1.63
LDLRP01130 AC095055.1-201ENST00000603472 1113 ntBASIC4.9□□□□□ -1.63
LDLRP01130 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 AL135786.2-201ENST00000608422 615 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AL391834.1-201ENST00000609609 560 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms