Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HMGB1P16-201ENST00000447155 540 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 AL935212.3-201ENST00000450729 284 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 RPL23AP56-201ENST00000460778 453 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 NDUFA5P12-201ENST00000503796 343 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 COX6B1P5-201ENST00000509843 249 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 AC084759.1-201ENST00000561168 290 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 CR381572.2-201ENST00000624852 397 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.57□□□□□ -1.68
SHOX2O60902 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHOX2O60902 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHOX2O60902 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SHOX2O60902 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHOX2O60902 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 RPL12P43-201ENST00000420608 499 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 AF228730.2-201ENST00000438784 848 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC245047.2-201ENST00000441060 530 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 MTND2P25-201ENST00000449028 610 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 ABCF2P2-201ENST00000450549 296 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC090142.1-201ENST00000465776 462 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC098583.1-201ENST00000480875 255 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 AC108693.1-201ENST00000496068 432 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.56□□□□□ -1.68
SHOX2O60902 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 AC017037.1-201ENST00000508460 471 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 RNU6-943P-201ENST00000516960 98 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 BUD31P1-201ENST00000521828 359 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.56□□□□□ -1.68
SHOX2O60902 PHBP17-201ENST00000528576 541 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.56□□□□□ -1.68
SHOX2O60902 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHOX2O60902 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHOX2O60902 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 NXPH1-205ENST00000602349 1953 ntBASIC4.56□□□□□ -1.68
SHOX2O60902 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHOX2O60902 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SHOX2O60902 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHOX2O60902 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHOX2O60902 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.55□□□□□ -1.68
SHOX2O60902 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SHOX2O60902 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
SHOX2O60902 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHOX2O60902 RNA5SP183-201ENST00000362452 119 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHOX2O60902 SNORA81-201ENST00000408493 178 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 FAR2P2-201ENST00000413041 594 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.55□□□□□ -1.68
SHOX2O60902 MTND4LP21-201ENST00000415303 295 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 CYP4F29P-201ENST00000420685 446 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 RPL23AP89-201ENST00000439324 255 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 FAR2P1-206ENST00000449736 709 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 RPL7AP10-201ENST00000481016 791 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 RN7SL205P-201ENST00000490174 284 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 RN7SL808P-201ENST00000496066 299 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC146944.2-203ENST00000502493 354 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC111000.5-201ENST00000506559 1178 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AL592156.1-201ENST00000508758 304 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC139495.1-202ENST00000513164 354 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 RPS27AP18-201ENST00000515536 459 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 BX510359.5-201ENST00000515651 304 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 OR7E128P-201ENST00000532736 1024 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AL049779.2-201ENST00000553847 315 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC141257.3-201ENST00000572906 215 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 ADAD1P2-201ENST00000588476 646 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 AC073137.1-201ENST00000605636 634 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 AC007546.2-201ENST00000623996 360 ntBASIC4.55□□□□□ -1.68
SHOX2O60902 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.55□□□□□ -1.68
SHOX2O60902 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms