Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FAM72A-208ENST00000607379 1139 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC105227.2-201ENST00000615075 605 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 MIR6071-201ENST00000616741 78 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC005840.5-201ENST00000619166 599 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 MIR193BHG-214ENST00000641765 509 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC073869.8-201ENST00000641806 335 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 AC133552.1-201ENST00000569988 4007 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 AC020633.1-201ENST00000468439 2247 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 AL034549.2-201ENST00000618285 3373 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.43□□□□□ -1.54
PHGDHO43175 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC097461.1-201ENST00000568928 2821 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PHGDHO43175 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 AC119744.1-201ENST00000454746 1715 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 AC104454.1-201ENST00000421341 1401 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC114786.1-201ENST00000512892 1415 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 FAM133CP-201ENST00000332869 704 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.43□□□□□ -1.54
PHGDHO43175 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 Y_RNA.465-201ENST00000384293 102 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 LYPLA1P3-201ENST00000402650 695 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 OR6D1P-201ENST00000436165 939 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 COX7BP2-201ENST00000437976 242 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 MTND2P22-201ENST00000444325 1033 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC011476.1-201ENST00000466725 307 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC011979.1-201ENST00000472300 483 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 PFN1P8-201ENST00000497012 543 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 RPL7L1P4-201ENST00000513004 707 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 FABP5P12-201ENST00000515543 389 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.43□□□□□ -1.54
PHGDHO43175 SCARNA20.4-201ENST00000516969 131 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 TMEM97P2-201ENST00000517841 403 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC027026.1-201ENST00000532323 742 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 DUXAP6-201ENST00000553858 601 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.43□□□□□ -1.54
PHGDHO43175 MRPS21P7-201ENST00000566937 238 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AL354943.1-201ENST00000572103 781 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC107075.1-201ENST00000613695 314 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC078883.4-201ENST00000623218 367 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC135068.5-201ENST00000624197 983 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PHGDHO43175 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 AC125336.1-201ENST00000508893 2827 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 BRAFP1-201ENST00000445336 2703 ntBASIC5.43□□□□□ -1.54
PHGDHO43175 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHGDHO43175 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.43□□□□□ -1.54
PHGDHO43175 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 AC025263.3-201ENST00000622965 1396 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PHGDHO43175 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 AL078621.3-201ENST00000623707 2042 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PHGDHO43175 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 SFR1P1-201ENST00000403720 688 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 GSTA8P-201ENST00000404253 637 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 SNORA11.5-201ENST00000408163 128 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 RNU2-6P-201ENST00000411404 190 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms