Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDH17O14917 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC018809.2-201ENST00000602436 3823 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDH17O14917 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 RNU6-171P-201ENST00000384354 107 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 U3.28-201ENST00000391249 210 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC009804.1-201ENST00000400949 179 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 DPPA2P3-201ENST00000411853 655 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC079809.1-201ENST00000415468 276 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 AC009784.1-201ENST00000426484 460 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC234064.1-201ENST00000436312 247 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDH17O14917 CBX1P4-201ENST00000439415 457 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 NANOGP9-201ENST00000439890 892 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDH17O14917 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 OTX2P1-201ENST00000450956 354 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 VDAC2P4-201ENST00000452925 711 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 AL161747.1-201ENST00000480068 358 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC004815.1-201ENST00000484185 331 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC090638.1-201ENST00000498296 909 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH17O14917 AC006499.3-201ENST00000506077 748 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 AC138832.1-201ENST00000522871 556 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 YWHABP2-201ENST00000540201 713 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDH17O14917 HSPE1P2-201ENST00000554777 306 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 SULT1C2P2-201ENST00000562517 294 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH17O14917 FKBP1AP1-201ENST00000594588 318 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 AL138478.1-201ENST00000612252 832 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 VN1R7P-201ENST00000619242 903 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 SAMMSON-227ENST00000642114 1199 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 AC006042.3-201ENST00000454684 1469 ntBASIC5.23□□□□□ -1.57
PCDH17O14917 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDH17O14917 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH17O14917 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDH17O14917 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH17O14917 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH17O14917 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDH17O14917 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 C4BPAP1-201ENST00000415474 1893 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH17O14917 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH17O14917 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH17O14917 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH17O14917 RN7SKP74-201ENST00000362849 309 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 RNU4-28P-201ENST00000364739 141 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH17O14917 SNORA70-201ENST00000384436 135 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 MIR513B-201ENST00000385136 84 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 RNU6-77P-201ENST00000410554 91 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 GPS2P1-201ENST00000411761 986 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH17O14917 RPF2P1-201ENST00000424137 906 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 C1DP1-201ENST00000426049 402 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH17O14917 NANOGP4-201ENST00000427230 913 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH17O14917 RPL12P17-201ENST00000432393 498 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH17O14917 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH17O14917 GAPDHP58-201ENST00000438477 1006 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL390119.1-201ENST00000440329 312 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 MTND1P26-201ENST00000440488 538 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 RPS11P7-201ENST00000442125 465 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AC112492.1-201ENST00000449607 712 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL591623.2-201ENST00000449978 222 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL354710.1-201ENST00000453641 246 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 BX248409.1-201ENST00000455497 255 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH17O14917 MTCO2P6-201ENST00000463134 685 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH17O14917 COX6B1P2-201ENST00000489624 230 ntBASIC5.22□□□□□ -1.57
PCDH17O14917 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms