Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.500-201ENST00000384466 111 ntBASIC7.77□□□□□ -1.17
CUX2O14529 Z98745.1-201ENST00000402553 494 ntBASIC7.77□□□□□ -1.17
CUX2O14529 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 NFYAP1-201ENST00000431953 972 ntBASIC7.77□□□□□ -1.17
CUX2O14529 PRELID3BP6-201ENST00000503839 571 ntBASIC7.77□□□□□ -1.17
CUX2O14529 NPM1P21-201ENST00000513394 762 ntBASIC7.77□□□□□ -1.17
CUX2O14529 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.77□□□□□ -1.17
CUX2O14529 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.77□□□□□ -1.17
CUX2O14529 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.77□□□□□ -1.17
CUX2O14529 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 SCARNA15.3-201ENST00000626315 122 ntBASIC7.77□□□□□ -1.17
CUX2O14529 SCARNA4.1-201ENST00000628597 123 ntBASIC7.77□□□□□ -1.17
CUX2O14529 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 CASC19-284ENST00000642142 1868 ntBASIC7.77□□□□□ -1.17
CUX2O14529 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CUX2O14529 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
CUX2O14529 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUX2O14529 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUX2O14529 AC023632.6-201ENST00000624338 2177 ntBASIC7.76□□□□□ -1.17
CUX2O14529 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.76□□□□□ -1.17
CUX2O14529 AC021660.1-201ENST00000465006 554 ntBASIC7.76□□□□□ -1.17
CUX2O14529 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.76□□□□□ -1.17
CUX2O14529 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.76□□□□□ -1.17
CUX2O14529 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.76□□□□□ -1.17
CUX2O14529 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.76□□□□□ -1.17
CUX2O14529 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CUX2O14529 AL022323.4-201ENST00000623980 13120 ntBASIC7.76□□□□□ -1.17
CUX2O14529 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUX2O14529 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUX2O14529 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.76□□□□□ -1.17
CUX2O14529 AC135352.1-201ENST00000506173 1418 ntBASIC7.76□□□□□ -1.17
CUX2O14529 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.76□□□□□ -1.17
CUX2O14529 AC006042.3-201ENST00000454684 1469 ntBASIC7.76□□□□□ -1.17
CUX2O14529 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUX2O14529 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CUX2O14529 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUX2O14529 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CUX2O14529 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.75□□□□□ -1.17
CUX2O14529 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.75□□□□□ -1.17
CUX2O14529 AP001804.2-201ENST00000533932 910 ntBASIC7.75□□□□□ -1.17
CUX2O14529 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.75□□□□□ -1.17
CUX2O14529 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CUX2O14529 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 AC108467.2-201ENST00000617640 1597 ntBASIC7.75□□□□□ -1.17
CUX2O14529 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 AL158163.1-201ENST00000603915 1649 ntBASIC7.75□□□□□ -1.17
CUX2O14529 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUX2O14529 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CUX2O14529 RNA5SP432-201ENST00000362480 116 ntBASIC7.75□□□□□ -1.17
CUX2O14529 MIR183-201ENST00000384958 110 ntBASIC7.75□□□□□ -1.17
CUX2O14529 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.75□□□□□ -1.17
CUX2O14529 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.75□□□□□ -1.17
CUX2O14529 MRPL48P1-201ENST00000445390 636 ntBASIC7.75□□□□□ -1.17
CUX2O14529 RPS20P4-201ENST00000461659 355 ntBASIC7.75□□□□□ -1.17
CUX2O14529 AC090136.1-201ENST00000520009 240 ntBASIC7.75□□□□□ -1.17
CUX2O14529 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.75□□□□□ -1.17
CUX2O14529 AGGF1P9-201ENST00000561884 913 ntBASIC7.75□□□□□ -1.17
CUX2O14529 uc_338.13-201ENST00000618243 179 ntBASIC7.75□□□□□ -1.17
CUX2O14529 RLIMP1-201ENST00000339626 1680 ntBASIC7.74□□□□□ -1.17
CUX2O14529 TRIM51GP-201ENST00000534741 1350 ntBASIC7.74□□□□□ -1.17
CUX2O14529 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC7.74□□□□□ -1.17
CUX2O14529 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 EIF3EP2-201ENST00000423042 1814 ntBASIC7.74□□□□□ -1.17
CUX2O14529 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUX2O14529 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUX2O14529 SNORA5.1-201ENST00000384275 131 ntBASIC7.74□□□□□ -1.17
CUX2O14529 AL451139.1-201ENST00000434718 346 ntBASIC7.74□□□□□ -1.17
CUX2O14529 MRPS21P3-201ENST00000436696 262 ntBASIC7.74□□□□□ -1.17
CUX2O14529 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC7.74□□□□□ -1.17
CUX2O14529 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.74□□□□□ -1.17
CUX2O14529 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.74□□□□□ -1.17
CUX2O14529 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.74□□□□□ -1.17
CUX2O14529 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.74□□□□□ -1.17
CUX2O14529 DYNLL1P4-201ENST00000549314 266 ntBASIC7.74□□□□□ -1.17
CUX2O14529 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.74□□□□□ -1.17
CUX2O14529 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUX2O14529 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUX2O14529 MTND5P1-201ENST00000445440 1375 ntBASIC7.73□□□□□ -1.17
CUX2O14529 AC024560.2-201ENST00000507981 1497 ntBASIC7.73□□□□□ -1.17
CUX2O14529 MARK2P15-201ENST00000432204 2186 ntBASIC7.73□□□□□ -1.17
CUX2O14529 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CUX2O14529 CCAT2-201ENST00000630920 1752 ntBASIC7.73□□□□□ -1.17
CUX2O14529 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUX2O14529 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms