Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 SNX18P3-202ENST00000565670 1750 ntBASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHGA11Q9Y5H2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC096921.2-201ENST00000561507 1916 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC108467.2-201ENST00000617640 1597 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RPL10P16-201ENST00000325000 645 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-223P-201ENST00000362830 107 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SKP1-201ENST00000365525 307 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-952P-201ENST00000391164 108 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC245036.1-201ENST00000391727 309 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 TXNP7-201ENST00000406296 293 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC013429.2-201ENST00000418798 781 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AL592114.2-201ENST00000440142 532 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 BNIP3P2-201ENST00000441221 577 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 CYCSP44-201ENST00000448560 313 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SL145P-201ENST00000469955 296 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RPS14P8-201ENST00000478778 369 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-202P-201ENST00000515998 96 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 SNORD60.2-201ENST00000516883 86 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC024405.1-201ENST00000532521 1042 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 NXPE2P1-201ENST00000543705 726 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AL031846.1-201ENST00000560933 314 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC113139.1-201ENST00000605049 239 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AP001437.1-201ENST00000608783 456 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC093913.1-201ENST00000614178 329 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC005858.4-201ENST00000623191 700 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 CYP2G2P-201ENST00000594920 1485 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 AC005034.3-201ENST00000604845 1747 ntBASIC6.84□□□□□ -1.31
PCDHGA11Q9Y5H2 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHGA11Q9Y5H2 CCDC150P1-201ENST00000537123 2215 ntBASIC6.84□□□□□ -1.32
PCDHGA11Q9Y5H2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHGA11Q9Y5H2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.84□□□□□ -1.32
PCDHGA11Q9Y5H2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 TCP11X1-202ENST00000622971 1372 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC104837.1-201ENST00000444644 1587 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL23AP57-201ENST00000332361 466 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 Y_RNA.138-201ENST00000363462 102 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms