Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 USP9YP4-201ENST00000424401 1745 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC017002.4-201ENST00000604721 1525 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 OR11H5P-202ENST00000641612 1325 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 CHMP1B2P-201ENST00000399581 597 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SKP240-201ENST00000410583 375 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RNU6-603P-201ENST00000411403 107 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SKP1P3-201ENST00000429280 487 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 CYCSP12-201ENST00000437729 300 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 OR7E125P-201ENST00000443450 846 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RPL35AP19-201ENST00000469425 329 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC012158.1-204ENST00000483430 465 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC090543.1-201ENST00000492168 485 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SL244P-201ENST00000493405 297 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 HMGB1P3-201ENST00000502802 616 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 RNA5SP392-201ENST00000516905 112 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC023158.1-201ENST00000561632 1025 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 CCDC58P1-201ENST00000578567 430 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 ARGFXP2-201ENST00000579304 949 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC068790.5-201ENST00000602741 355 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SUGT1P3-202ENST00000604259 383 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC108865.2-201ENST00000606881 432 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 MIR6737-201ENST00000617385 70 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 AC005086.4-201ENST00000623065 213 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 IRF5P1-201ENST00000504852 2164 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 MAPK10-304ENST00000641341 3984 ntBASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 KARSP3-201ENST00000571212 1504 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AP001002.1-201ENST00000625148 1513 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC093311.1-201ENST00000506586 2021 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC008758.3-201ENST00000507003 1829 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 SNORA27.3-201ENST00000364937 134 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RNU6-244P-201ENST00000391028 104 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 Z97832.1-201ENST00000402490 328 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RPS27AP11-201ENST00000402798 447 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RNA5SP498-201ENST00000411342 120 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 DPY19L1P2-201ENST00000426647 915 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RPL36AP39-201ENST00000445859 318 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 NDUFA5P8-201ENST00000449019 346 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 TCEA1P1-201ENST00000449716 880 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 IGHV5-78-201ENST00000450948 295 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 EIF4A1P11-201ENST00000451239 222 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 HGF-207ENST00000453018 721 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC092691.2-201ENST00000461787 803 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC006967.1-201ENST00000467608 589 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 HMGB3P14-201ENST00000494195 599 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RNA5SP154-201ENST00000516193 111 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 RNU6-889P-201ENST00000517189 103 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC135001.1-201ENST00000544546 283 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AC126177.5-201ENST00000549599 178 ntBASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4□□□□□ -1.77
KCNIP3Q9Y2W7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms