Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC090971.5-201ENST00000621102 293 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 MIR1302-1-201ENST00000637932 143 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 HSPA8P17-201ENST00000427029 1382 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 OR52B5P-204ENST00000641744 3467 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.72-201ENST00000362894 103 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.86-201ENST00000363020 111 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RN7SKP78-201ENST00000364711 318 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-209P-201ENST00000384118 107 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.476-201ENST00000384347 108 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-1026P-201ENST00000384465 108 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-1005P-201ENST00000384519 107 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RPL21P50-201ENST00000417698 477 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC114482.1-201ENST00000418010 247 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 SNRPEP4-201ENST00000435815 279 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AMYP1-201ENST00000440059 1023 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RPS15AP36-201ENST00000492022 382 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC018645.1-201ENST00000505003 109 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC011611.1-201ENST00000552179 197 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC106785.4-201ENST00000569492 412 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL683813.2-201ENST00000605245 502 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 OR8G7P-201ENST00000616658 848 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AL596275.2-208ENST00000641192 594 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 RNF19BPY-201ENST00000458209 1550 ntBASIC8.31□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF812P-201ENST00000457674 1694 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-185P-201ENST00000384421 107 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC004386.1-201ENST00000393214 761 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 VN1R8P-201ENST00000407739 893 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC073136.2-201ENST00000417282 849 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC104843.2-201ENST00000427666 297 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 IGLV3-4-201ENST00000432300 244 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC024082.2-201ENST00000434771 238 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 TMX2P1-201ENST00000436507 708 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RPL21P134-201ENST00000453468 483 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RPL7P32-201ENST00000457119 744 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RPL23AP64-201ENST00000469465 435 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC015864.1-201ENST00000496512 544 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC008629.2-201ENST00000503783 483 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 HMGB1P44-201ENST00000508597 572 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.711-201ENST00000516993 102 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms