Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 HMGB1P26-201ENST00000452520 628 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC005229.2-201ENST00000456995 399 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AL591473.1-201ENST00000464297 313 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC090686.1-201ENST00000481577 749 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 RN7SL97P-201ENST00000486780 299 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC020890.1-201ENST00000491837 504 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 RPL37AP8-201ENST00000494116 276 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 HMGB1P3-201ENST00000502802 616 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC138938.1-201ENST00000515431 782 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 SNORD116-26-201ENST00000516006 96 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC084757.1-201ENST00000559987 490 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AL390726.5-202ENST00000564800 256 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC022884.3-201ENST00000579571 248 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 MIR4716-201ENST00000579628 84 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AL133406.3-201ENST00000606817 541 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 MIR8069-1-201ENST00000616627 86 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 uc_338.9-201ENST00000617424 182 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 MIR8069-2-201ENST00000621412 86 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 AC015871.5-202ENST00000623252 701 ntBASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA9Q9UGM1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CHRNA9Q9UGM1 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.69
CHRNA9Q9UGM1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CHRNA9Q9UGM1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 UBBP2-201ENST00000376781 231 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AL359643.1-201ENST00000404109 423 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 MIR1271-201ENST00000408537 86 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC073069.1-201ENST00000428657 441 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 RHEBP2-201ENST00000450289 600 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 RNA5SP103-201ENST00000459503 118 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 RPL7AP6-201ENST00000477943 801 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC116562.1-201ENST00000485355 781 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC008638.1-201ENST00000506035 866 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 RNU6-347P-201ENST00000516658 105 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC026688.1-201ENST00000520639 1168 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AL391834.1-201ENST00000609609 560 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC100847.1-201ENST00000611316 481 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC091905.4-201ENST00000623432 202 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 CASC19-222ENST00000641321 1173 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 OR5AC4P-202ENST00000642086 985 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AP001642.1-201ENST00000624727 2117 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 DHX9P1-201ENST00000436565 3076 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC000123.3-201ENST00000624029 4975 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 AC007390.2-201ENST00000606229 3803 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 OR51C1P-202ENST00000641159 1444 ntBASIC4.46□□□□□ -1.7
CHRNA9Q9UGM1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 AC011155.1-201ENST00000316512 456 ntBASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 AC008549.2-201ENST00000333482 706 ntBASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 MIR105-2-201ENST00000385083 81 ntBASIC4.45□□□□□ -1.7
CHRNA9Q9UGM1 AC013404.1-201ENST00000413068 249 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms