Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC017104.5-201ENST00000637647 639 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC120338.1-201ENST00000625074 1541 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RNU6-697P-201ENST00000363348 107 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MIR421-201ENST00000365696 85 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC092570.3-201ENST00000420113 693 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 XKRYP1-201ENST00000423438 492 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RNF19BPX-201ENST00000426224 625 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC124944.2-201ENST00000429866 1242 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RPL12P28-201ENST00000430852 489 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 XKRYP2-201ENST00000432915 492 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL161722.2-201ENST00000434731 981 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MTCO2P3-201ENST00000442543 421 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 SETD6P1-201ENST00000444575 317 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MOB1AP2-201ENST00000446060 614 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 ART2BP-201ENST00000453501 499 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RPS29P33-201ENST00000456717 146 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 snoU109.3-201ENST00000459477 145 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RN7SL189P-201ENST00000468631 289 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RN7SL738P-201ENST00000470264 297 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC006463.2-201ENST00000473326 348 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 RPL7P41-201ENST00000485823 957 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 OR7H2P-201ENST00000513483 306 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 BNIP3P1-201ENST00000547295 580 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MTND2P17-201ENST00000550281 688 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC079075.1-201ENST00000559543 878 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 ELOCP28-201ENST00000590044 317 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL358072.1-201ENST00000604156 575 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC096586.1-201ENST00000610267 561 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC245389.2-201ENST00000616023 576 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC025016.1-201ENST00000616746 682 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC242843.1-201ENST00000618702 573 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC079298.2-201ENST00000623885 459 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AL512506.2-201ENST00000624472 458 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 AC104623.2-202ENST00000623477 4002 ntBASIC5.29□□□□□ -1.56
EBF3Q9H4W6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EBF3Q9H4W6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL390862.1-201ENST00000635467 1469 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ZNF29P-201ENST00000225587 168 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RNA5SP87-201ENST00000384155 118 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 SNORA66-201ENST00000384792 133 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RPL22P22-201ENST00000395439 379 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP002530.1-201ENST00000405705 684 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RPL12P9-201ENST00000412942 488 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RPL7AP49-201ENST00000429522 581 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 USP9YP14-201ENST00000430663 563 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 MTCO1P45-201ENST00000431457 267 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL591438.1-201ENST00000433508 581 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms