Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 TXNP2-201ENST00000443918 295 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AL589765.3-201ENST00000446084 462 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC091544.1-201ENST00000484702 348 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC138409.2-202ENST00000507274 458 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 MIR7703-201ENST00000620784 77 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC083843.3-201ENST00000623679 2186 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 EOGT-210ENST00000615922 1931 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 SNORA48.7-201ENST00000391302 135 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 MIR298-201ENST00000401212 88 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 ATG4AP1-201ENST00000416893 538 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 NPM1P33-201ENST00000438918 872 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 ISCUP1-201ENST00000454451 448 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AC093824.1-201ENST00000508796 343 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 RN7SKP92-201ENST00000517266 244 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 CYCSP28-201ENST00000534284 321 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AL590392.1-201ENST00000604960 446 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 IQCB2P-201ENST00000401788 1633 ntBASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
UPF3BQ9BZI7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 RNU1-20P-201ENST00000363314 162 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 RN7SKP199-201ENST00000410325 305 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 BX510359.2-201ENST00000417920 305 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC016831.4-201ENST00000438302 307 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 RPL36AP15-201ENST00000444514 266 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 SCARNA10-201ENST00000459255 330 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC020898.1-201ENST00000474167 787 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC104763.1-201ENST00000475274 360 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 OR5M2P-201ENST00000529003 936 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC027455.1-201ENST00000574104 594 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC091178.1-203ENST00000584586 279 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC098935.2-201ENST00000604222 466 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC016542.2-201ENST00000624201 619 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC092435.4-201ENST00000623012 4159 ntBASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
UPF3BQ9BZI7 AC021146.4-201ENST00000309229 279 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 RN7SKP267-201ENST00000410381 285 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 SEPT7P8-201ENST00000413308 775 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms