Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC127024.5-201ENST00000580085 462 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC010487.1-201ENST00000594408 1172 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 OR8G7P-201ENST00000616658 848 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC104260.2-201ENST00000623551 3497 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 MT-RNR1-201ENST00000389680 954 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 RPL21P65-201ENST00000406094 466 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 ARL4AP4-201ENST00000434170 518 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC146944.2-203ENST00000502493 354 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC139495.1-202ENST00000513164 354 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AL583832.1-201ENST00000603227 784 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 AC079587.1-201ENST00000603846 277 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 Z95327.3-201ENST00000610385 572 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 FRG1EP-201ENST00000634469 770 ntBASIC6.74□□□□□ -1.33
SCAPERQ9BY12 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCAPERQ9BY12 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 RNA5SP130-201ENST00000364431 114 ntBASIC6.73□□□□□ -1.33
SCAPERQ9BY12 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 RPS29P7-201ENST00000439662 171 ntBASIC6.73□□□□□ -1.33
SCAPERQ9BY12 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 RPL23AP2-201ENST00000471227 466 ntBASIC6.73□□□□□ -1.33
SCAPERQ9BY12 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 RNA5SP49-201ENST00000516450 115 ntBASIC6.73□□□□□ -1.33
SCAPERQ9BY12 AC053481.4-201ENST00000583164 216 ntBASIC6.73□□□□□ -1.33
SCAPERQ9BY12 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCAPERQ9BY12 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 DDX18P5-201ENST00000534547 1306 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AC027228.2-201ENST00000567141 2154 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 OR51H2P-202ENST00000641424 3046 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AC125336.1-201ENST00000508893 2827 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 SNORD46.1-201ENST00000364139 104 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 MIR3065-201ENST00000390137 79 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 PTMAP2-201ENST00000397627 327 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AC104333.2-201ENST00000422630 192 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AC245028.2-201ENST00000458673 253 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 NPM1P41-201ENST00000512920 831 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 AL627171.1-201ENST00000618845 1308 ntBASIC6.72□□□□□ -1.33
SCAPERQ9BY12 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCAPERQ9BY12 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCAPERQ9BY12 A2MP1-204ENST00000566278 4130 ntBASIC6.71□□□□□ -1.33
SCAPERQ9BY12 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.71□□□□□ -1.33
SCAPERQ9BY12 AC008549.2-201ENST00000333482 706 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AL035696.2-201ENST00000407941 709 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC009237.5-201ENST00000414271 501 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 MFSD13B-201ENST00000420133 1290 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 RPL37P1-201ENST00000432310 284 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AL356276.2-201ENST00000435919 558 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms