Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC004890.3-201ENST00000605566 1095 ntBASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AL592295.2-201ENST00000612578 206 ntBASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC097641.3-201ENST00000613523 464 ntBASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AP003122.6-201ENST00000623831 495 ntBASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 AP002370.1-201ENST00000528055 1602 ntBASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSBP3Q9BWW4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC109315.1-201ENST00000584143 1347 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL355377.1-201ENST00000621125 1653 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.356-201ENST00000365475 113 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 SNORD65.1-201ENST00000390889 71 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL121878.1-201ENST00000418638 859 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AIMP1P1-201ENST00000418670 937 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC092647.1-201ENST00000420654 287 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 RPL31P54-201ENST00000429803 370 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 RPSAP40-201ENST00000442343 891 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 SNRPFP4-201ENST00000456366 242 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC117394.1-201ENST00000477323 567 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 RPL34P33-201ENST00000486062 334 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AP002453.1-201ENST00000492327 668 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MTCO3P9-201ENST00000506989 781 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 DUTP7-201ENST00000507982 486 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 KHDC1P1-201ENST00000511053 508 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 RNU6-1225P-201ENST00000516336 65 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.675-201ENST00000516389 149 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC084121.1-201ENST00000533882 835 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC125611.2-201ENST00000551907 647 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 NIFKP8-201ENST00000560500 874 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MIR4666A-201ENST00000580160 79 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MIR4502-201ENST00000580432 81 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC060780.3-201ENST00000589464 80 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC068020.1-201ENST00000594215 661 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC130352.1-201ENST00000602979 661 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL009028.1-201ENST00000604895 802 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 RPSAP75-201ENST00000605848 301 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Z98200.1-201ENST00000607298 470 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms