Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP2Q99959 OR9N1P-202ENST00000494289 481 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 RPS4XP18-201ENST00000495480 763 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP2Q99959 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.7□□□□□ -1.66
PKP2Q99959 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP2Q99959 RNU6-941P-201ENST00000516346 108 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP2Q99959 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.7□□□□□ -1.66
PKP2Q99959 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.7□□□□□ -1.66
PKP2Q99959 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP2Q99959 MIR1269B-201ENST00000580405 75 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP2Q99959 AC090948.2-201ENST00000607363 564 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP2Q99959 AL356490.1-201ENST00000623079 479 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PKP2Q99959 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PKP2Q99959 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP2Q99959 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP2Q99959 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 AC109780.1-201ENST00000451768 1344 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 AC235565.1-201ENST00000456962 1325 ntBASIC4.7□□□□□ -1.66
PKP2Q99959 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP2Q99959 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PKP2Q99959 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PKP2Q99959 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC009501.3-201ENST00000605001 1352 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 AP000568.1-201ENST00000282964 442 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 RN7SKP104-201ENST00000362605 328 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 RNU6-40P-201ENST00000384254 107 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 MIR195-201ENST00000385194 87 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 RN7SKP247-201ENST00000411094 308 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC019050.1-201ENST00000418508 492 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 RPL12P28-201ENST00000430852 489 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 SUMO2P3-201ENST00000438311 288 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 AL645937.3-201ENST00000453647 936 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 AL133445.1-201ENST00000467051 452 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 AC107398.1-201ENST00000486904 505 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC008628.1-201ENST00000508663 265 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 IGKV2D-10-201ENST00000520194 281 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 NRBF2P4-201ENST00000520874 850 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 SMARCE1P4-201ENST00000523647 241 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 OR4R2P-201ENST00000530815 597 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 BLZF2P-201ENST00000553776 1130 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 MIR548Y-201ENST00000582739 110 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC000068.2-201ENST00000608816 460 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC234782.5-201ENST00000617723 324 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC007683.2-201ENST00000624681 714 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP2Q99959 AC106858.1-201ENST00000637497 429 ntBASIC4.69□□□□□ -1.66
PKP2Q99959 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.69□□□□□ -1.66
PKP2Q99959 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP2Q99959 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP2Q99959 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PKP2Q99959 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
PKP2Q99959 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
PKP2Q99959 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.68□□□□□ -1.66
PKP2Q99959 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKP2Q99959 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms