Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AL592182.3-201ENST00000642132 3304 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 SNORA74C-2-201ENST00000411179 201 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 AL139095.3-201ENST00000419672 1203 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AL356387.2-201ENST00000422272 243 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC090151.1-201ENST00000520784 730 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 HMGB2P1-201ENST00000591146 634 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 VN1R85P-201ENST00000601587 426 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC016590.3-201ENST00000611171 753 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 AL133243.1-201ENST00000614487 366 ntBASIC6.25□□□□□ -1.41
CCDC7Q96M83 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC7Q96M83 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC7Q96M83 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 RNU1-130P-201ENST00000363930 160 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 VDAC1P9-201ENST00000412766 841 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 RPL7AP25-201ENST00000423357 805 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 RPL21P7-201ENST00000557463 483 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC024941.1-201ENST00000612250 334 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AP005019.3-201ENST00000620418 560 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC7Q96M83 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC7Q96M83 NXPH1-205ENST00000602349 1953 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 AL513548.1-201ENST00000562904 1724 ntBASIC6.24□□□□□ -1.41
CCDC7Q96M83 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.23□□□□□ -1.41
CCDC7Q96M83 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.23□□□□□ -1.41
CCDC7Q96M83 RPL23AP97-201ENST00000568955 471 ntBASIC6.23□□□□□ -1.41
CCDC7Q96M83 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 AC093227.2-201ENST00000589357 285 ntBASIC6.23□□□□□ -1.41
CCDC7Q96M83 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC7Q96M83 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC7Q96M83 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.23□□□□□ -1.41
CCDC7Q96M83 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC7Q96M83 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
CCDC7Q96M83 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC7Q96M83 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 SNORA70C-201ENST00000384538 135 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 SEPT7P8-201ENST00000413308 775 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 RPL21P108-201ENST00000413857 481 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 AC010740.1-201ENST00000417035 684 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 AL358176.3-201ENST00000420757 454 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 AC062016.2-201ENST00000420950 676 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 ARAFP1-201ENST00000422172 605 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 NPM1P26-201ENST00000426339 738 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 CDC27P1-201ENST00000445384 715 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 RN7SL303P-201ENST00000469773 251 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 MTCO1P35-201ENST00000515270 228 ntBASIC6.22□□□□□ -1.41
CCDC7Q96M83 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC7Q96M83 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC7Q96M83 OR7A8P-201ENST00000595427 913 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms