Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 RN7SL722P-201ENST00000617780 284 ntBASIC4.73□□□□□ -1.65
C9orf72Q96LT7 RN7SL565P-201ENST00000618246 284 ntBASIC4.73□□□□□ -1.65
C9orf72Q96LT7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.73□□□□□ -1.65
C9orf72Q96LT7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
C9orf72Q96LT7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 RNU6-1263P-201ENST00000384601 106 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC019050.1-201ENST00000418508 492 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC013470.3-201ENST00000420252 1194 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AL513533.1-201ENST00000453728 415 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC006967.1-201ENST00000467608 589 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC008897.1-201ENST00000494006 347 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC025164.1-201ENST00000496249 478 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AK4P6-201ENST00000505168 528 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 RNU1-6P-201ENST00000516290 144 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC018442.3-201ENST00000523025 183 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 HIGD1AP5-201ENST00000529959 259 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC025423.2-201ENST00000537570 439 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 RN7SL176P-201ENST00000580352 264 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC091178.1-203ENST00000584586 279 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AC008966.2-201ENST00000606157 453 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 MIR6780A-201ENST00000615089 68 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 AP003400.2-201ENST00000624036 666 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 NCLP2-201ENST00000416078 1462 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 RLIMP2-201ENST00000427891 1563 ntBASIC4.72□□□□□ -1.65
C9orf72Q96LT7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
C9orf72Q96LT7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 MTCO1P22-201ENST00000604619 1360 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 RPS4XP9-201ENST00000405151 780 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL807761.1-201ENST00000417622 171 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL358176.3-201ENST00000420757 454 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 RAB9AP5-201ENST00000437794 597 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 RAB9AP2-201ENST00000443911 597 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC073264.2-201ENST00000448886 166 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC011005.3-201ENST00000491624 395 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC108022.1-201ENST00000493466 478 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC092593.2-201ENST00000513866 913 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AP002981.1-201ENST00000517692 975 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AP001880.2-201ENST00000538233 448 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC234771.5-201ENST00000600161 514 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL133406.3-201ENST00000606817 541 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 OR7A19P-201ENST00000608051 733 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL353726.1-201ENST00000614041 1000 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AC023509.5-201ENST00000617434 807 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms