Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC090181.2-201ENST00000602975 672 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC091979.2-201ENST00000607514 214 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 uc_338.13-201ENST00000618243 179 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC006065.6-201ENST00000625201 545 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 DDX18P5-201ENST00000534547 1306 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL158163.1-201ENST00000603915 1649 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 MIR331-201ENST00000362302 94 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 SETP9-201ENST00000423837 832 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 HSFY1P1-201ENST00000423928 1178 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC135999.1-201ENST00000478962 479 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC090686.1-201ENST00000481577 749 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL359219.2-201ENST00000555184 348 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC015912.2-201ENST00000571053 181 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC039056.2-201ENST00000622261 511 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AC015804.1-201ENST00000622935 435 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC104623.2-202ENST00000623477 4002 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 CYCSP19-201ENST00000411715 316 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 RFESDP1-201ENST00000422350 461 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 NPM1P26-201ENST00000426339 738 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC144521.1-201ENST00000607148 956 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC241377.1-201ENST00000619797 406 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 CDRT1-208ENST00000630868 794 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 AC009950.2-201ENST00000636548 183 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.47□□□□□ -1.53
SNED1Q8TER0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SNED1Q8TER0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNED1Q8TER0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SNED1Q8TER0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNED1Q8TER0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.46□□□□□ -1.53
SNED1Q8TER0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNED1Q8TER0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 SNORA11F-201ENST00000408237 128 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 MTND2P11-201ENST00000423638 648 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC006946.1-201ENST00000429106 328 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC017099.1-201ENST00000448261 1028 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms