Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 CYCSP6-201ENST00000434498 302 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 GAPDHP58-201ENST00000438477 1006 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 VN1R25P-201ENST00000443385 738 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL353898.1-201ENST00000444055 238 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RPS27P5-201ENST00000444247 244 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 Z73417.1-201ENST00000447373 778 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 BX842559.2-201ENST00000451418 605 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC092155.2-201ENST00000454675 477 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RN7SL184P-201ENST00000488308 297 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 HMGB1P19-201ENST00000517578 577 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 BNIP3P1-201ENST00000547295 580 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC027455.1-201ENST00000574104 594 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC007204.2-201ENST00000615022 616 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RMST_10.1-201ENST00000616309 154 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC005840.5-201ENST00000619166 599 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC105105.5-201ENST00000622635 1294 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RNU1-149P-201ENST00000390870 161 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RN7SKP16-201ENST00000410180 299 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RNU2-17P-201ENST00000410290 190 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LIPT1P1-201ENST00000415870 1186 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 OR5M12P-201ENST00000423388 929 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 MTND5P25-201ENST00000430499 799 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 Z83846.1-201ENST00000446798 265 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC144530.1-201ENST00000452862 555 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL122001.1-201ENST00000457027 370 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC023141.9-201ENST00000458734 412 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 RN7SL447P-201ENST00000494711 245 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC090022.1-201ENST00000546569 311 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC008126.1-201ENST00000549019 480 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL589674.2-201ENST00000604304 337 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC021755.4-201ENST00000616620 456 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL035461.2-201ENST00000619201 524 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AL158062.1-201ENST00000619632 745 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC092159.4-201ENST00000624944 550 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 CYP4F35P-202ENST00000636121 390 ntBASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 BRAFP1-201ENST00000445336 2703 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms