Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 TPTEP1-208ENST00000636884 213 ntBASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
DEPDC4Q8N2C3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL161781.1-201ENST00000354277 403 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC005294.1-201ENST00000355509 281 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-223P-201ENST00000362830 107 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-169P-201ENST00000365336 107 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RNA5SP18-201ENST00000390935 121 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL162578.1-201ENST00000406202 378 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC017104.2-201ENST00000417000 321 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC009161.1-201ENST00000417306 376 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CYP4F32P-201ENST00000426492 504 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 OR2B7P-201ENST00000429302 934 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC019185.3-201ENST00000438805 323 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 FABP5P2-201ENST00000439042 408 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC011742.2-201ENST00000443818 352 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RPSAP49-201ENST00000445182 886 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 MRPL50P4-201ENST00000446432 475 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 TRBV26-201ENST00000456572 344 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RPL34P22-201ENST00000468193 318 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AP000893.1-201ENST00000474462 794 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RPL5P12-201ENST00000477071 851 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC096576.1-201ENST00000489014 359 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RPL38P4-201ENST00000502376 214 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC079768.1-201ENST00000503181 711 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 TXNP6-201ENST00000510190 310 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RNU7-30P-201ENST00000516835 62 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC087241.2-201ENST00000535801 324 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL237P-201ENST00000580912 287 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 LLPHP1-201ENST00000603571 367 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL355816.1-201ENST00000607951 118 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC233309.1-201ENST00000619522 751 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AL590396.3-201ENST00000636334 300 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC100810.6-201ENST00000638068 285 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RPL36AP21-202ENST00000639134 430 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 LPAL2-203ENST00000454031 2498 ntBASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.78□□□□□ -1.32
DEPDC4Q8N2C3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC092125.1-201ENST00000562568 1995 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RN7SKP50-201ENST00000364694 315 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms