Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL121977.1-201ENST00000401636 979 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL121834.1-202ENST00000404494 277 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL589994.1-201ENST00000404962 340 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 RNU2-42P-201ENST00000410697 113 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 BX890604.2-201ENST00000427883 474 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 SEPT7P5-201ENST00000434048 306 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL645939.3-201ENST00000435408 225 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 RPSAP40-201ENST00000442343 891 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 RPS27P20-201ENST00000492051 246 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC093664.1-201ENST00000511779 289 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC108064.1-201ENST00000513791 460 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 RN7SKP295-201ENST00000517264 153 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 OR5D15P-201ENST00000531671 942 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL163153.1-201ENST00000554223 283 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC063977.7-201ENST00000594454 337 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC125494.2-201ENST00000602431 657 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 MIR6071-201ENST00000616741 78 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AC073592.6-201ENST00000624271 415 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 AL359757.2-201ENST00000624309 274 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CASC19-232ENST00000641480 1244 ntBASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS3Q8IXF0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 OR1S2-201ENST00000302592 978 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.158-201ENST00000363651 101 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 RNA5SP512-201ENST00000364550 120 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL391419.1-201ENST00000398901 1275 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 NPM1P38-201ENST00000403835 865 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL354890.1-201ENST00000413730 346 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PTP4A1P1-201ENST00000420539 515 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 RPL31P35-201ENST00000431058 377 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL513175.1-201ENST00000431492 780 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 RPL37P21-201ENST00000435890 276 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 FAM103A2P-201ENST00000444122 354 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC093166.3-201ENST00000448785 303 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC022336.1-201ENST00000475510 337 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC117395.1-201ENST00000487390 403 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC091849.1-201ENST00000509920 121 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC011853.1-201ENST00000518911 454 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PSMA2P1-201ENST00000526365 646 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AP000790.1-201ENST00000528891 737 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 OR52K3P-201ENST00000531655 943 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 RRN3P3-201ENST00000549207 578 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC023827.2-201ENST00000566880 1061 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 KPNA2P3-201ENST00000584190 848 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC091133.5-201ENST00000603088 301 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PRELID3BP8-201ENST00000604148 295 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AP004372.1-201ENST00000604842 844 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AC062037.2-201ENST00000610137 73 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms