Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AC092868.3-201ENST00000560515 784 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AC104687.2-201ENST00000604442 342 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 MEMO1P5-201ENST00000604810 406 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AL159169.2-201ENST00000610061 1269 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AC074276.2-201ENST00000619891 348 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 AL606537.1-201ENST00000607258 2011 ntBASIC4.55□□□□□ -1.68
CCDC71Q8IV32 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71Q8IV32 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 RNU4-39P-201ENST00000362455 127 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 RNU1-83P-201ENST00000363426 164 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 RNU6-1251P-201ENST00000364502 107 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 RNA5SP87-201ENST00000384155 118 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 SNORA77-201ENST00000408716 125 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 MTND6P18-201ENST00000439477 513 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 KNOP1P3-201ENST00000446933 426 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC063943.1-201ENST00000465434 453 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC022795.1-201ENST00000473808 480 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC098583.1-201ENST00000480875 255 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 RN7SL459P-201ENST00000481078 302 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 DEFB109F-201ENST00000491870 277 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 CEACAMP10-202ENST00000495431 496 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 ARL4AP1-201ENST00000503220 705 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC113430.1-201ENST00000506872 718 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC108157.1-201ENST00000510511 539 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 MIMT1-201ENST00000597105 1050 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AF230666.2-201ENST00000602328 725 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC105254.2-201ENST00000603636 436 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AL161616.1-201ENST00000611867 286 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC015722.2-201ENST00000622210 551 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC105105.5-201ENST00000622635 1294 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC010435.1-201ENST00000623353 1177 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC020923.1-201ENST00000624021 917 ntBASIC4.54□□□□□ -1.68
CCDC71Q8IV32 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71Q8IV32 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 AC010132.2-201ENST00000295493 1043 ntBASIC4.53□□□□□ -1.68
CCDC71Q8IV32 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 RNVU1-6-201ENST00000364688 164 ntBASIC4.53□□□□□ -1.68
CCDC71Q8IV32 MIR421-201ENST00000365696 85 ntBASIC4.53□□□□□ -1.68
CCDC71Q8IV32 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 MIR192-201ENST00000384915 110 ntBASIC4.53□□□□□ -1.68
CCDC71Q8IV32 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71Q8IV32 ATP5HP3-201ENST00000396994 486 ntBASIC4.53□□□□□ -1.68
CCDC71Q8IV32 AP002530.1-201ENST00000405705 684 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms