Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP1BQ7LBR1 AC053481.2-202ENST00000582394 1500 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL672167.1-205ENST00000641112 3080 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC006971.1-201ENST00000407916 4486 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 GAPDHP15-201ENST00000398586 975 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 COX6B1P1-201ENST00000415962 213 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC013429.2-201ENST00000418798 781 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 MTCO2P1-201ENST00000424648 477 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL353898.1-201ENST00000444055 238 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 TRY2P-201ENST00000448860 689 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 HIGD1AP8-201ENST00000453927 274 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC093166.2-201ENST00000455969 1017 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 BX284632.1-201ENST00000478218 541 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 RFPL4AP5-201ENST00000514977 504 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC004923.2-201ENST00000529649 369 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 BRD9P1-201ENST00000529855 560 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 MTND5P21-201ENST00000531961 522 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC233266.2-201ENST00000567067 528 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 OR1F2P-201ENST00000570470 933 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC015911.5-201ENST00000587076 451 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 BNIP3P39-201ENST00000601077 554 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 MTCO2P22-201ENST00000603246 681 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AP001521.2-201ENST00000608772 546 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL445528.2-201ENST00000620582 470 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AC006249.1-201ENST00000621223 471 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL596275.2-204ENST00000641628 552 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 AL596275.2-206ENST00000641957 626 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP1BQ7LBR1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 RNU6-650P-201ENST00000365658 111 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 RNU6-31P-201ENST00000384388 108 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 MT-TP-201ENST00000387461 68 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL035419.1-201ENST00000397037 564 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL590762.4-201ENST00000425885 253 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL512661.1-201ENST00000434586 1253 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 TCEA1P1-201ENST00000449716 880 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 IGHV5-78-201ENST00000450948 295 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 OTX2P1-201ENST00000450956 354 ntBASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.5□□□□□ -1.69
CHMP1BQ7LBR1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms