Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CASC19-246ENST00000641625 1606 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC017007.4-201ENST00000503353 1352 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 RNU6-549P-201ENST00000384433 107 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AL512422.1-201ENST00000407033 553 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AL035422.1-201ENST00000414193 397 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 RPS26P38-201ENST00000414476 348 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 GTF2IP23-201ENST00000423746 351 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 ZYG11AP1-201ENST00000430329 837 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 YWHAZP2-201ENST00000440317 728 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 OR7E125P-201ENST00000443450 846 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC009963.3-201ENST00000458090 486 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC115223.1-201ENST00000466377 870 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 RN7SKP141-201ENST00000516167 338 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC036111.2-201ENST00000533247 901 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC008127.2-201ENST00000549925 1075 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC004825.1-201ENST00000555068 586 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 MIR3614-201ENST00000581261 86 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 MIR4795-201ENST00000584182 89 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC008752.3-201ENST00000588113 712 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC009220.3-201ENST00000604318 586 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC005021.1-201ENST00000608730 355 ntBASIC6.62□□□□□ -1.35
RNF43Q68DV7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 AC093297.3-201ENST00000607056 2517 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 PABPC1P9-201ENST00000426076 1612 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 TRAV35-201ENST00000390462 330 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL139805.1-201ENST00000407837 289 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 RN7SKP281-201ENST00000410472 352 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 RNA5SP80-201ENST00000410475 111 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 HMGN1P20-201ENST00000411849 300 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 RPL7AP14-201ENST00000424041 802 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 OR5AW1P-201ENST00000426334 1006 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC104843.2-201ENST00000427666 297 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 OR4F13P-201ENST00000428478 931 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL591363.1-201ENST00000450091 483 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 RPS27AP2-201ENST00000457576 465 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 RN7SL643P-201ENST00000471845 291 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 RPL12P31-201ENST00000478433 450 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 GM2AP2-201ENST00000491764 562 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC112184.1-201ENST00000505179 312 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 ATP1B1P1-201ENST00000509767 915 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 IGKV2-19-201ENST00000518132 283 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 IGHV4-55-201ENST00000520889 368 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 IGHV1-14-201ENST00000523391 241 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 OR5AQ1P-201ENST00000527596 927 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms