Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXF1Q12946 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXF1Q12946 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF1Q12946 RNA5SP497-201ENST00000516081 97 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 IGLVIV-65-201ENST00000517313 360 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF1Q12946 CYCSP28-201ENST00000534284 321 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 CR383656.6-201ENST00000550518 394 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 MIR4700-201ENST00000578311 74 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXF1Q12946 AC104785.1-201ENST00000603220 588 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AC091979.2-201ENST00000607514 214 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AP002360.3-201ENST00000607673 710 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AC012409.3-201ENST00000611343 981 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AC005332.5-201ENST00000591222 2919 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AL137100.1-201ENST00000556703 1620 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 AC092435.4-201ENST00000623012 4159 ntBASIC4.05□□□□□ -1.76
FOXF1Q12946 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF1Q12946 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF1Q12946 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
FOXF1Q12946 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FOXF1Q12946 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF1Q12946 MTHFD2P5-201ENST00000320415 844 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FOXF1Q12946 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 RNA5SP146-201ENST00000410743 123 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AC245028.1-201ENST00000423259 256 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.04□□□□□ -1.76
FOXF1Q12946 CNOT7P1-201ENST00000429006 852 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF1Q12946 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF1Q12946 FTH1P16-201ENST00000435241 552 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF1Q12946 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF1Q12946 RPL7AP28-201ENST00000464513 571 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AC096741.1-201ENST00000472250 846 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 RN7SL459P-201ENST00000481078 302 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
FOXF1Q12946 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF1Q12946 AC108022.1-201ENST00000493466 478 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF1Q12946 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF1Q12946 MIR4715-201ENST00000584117 79 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AP001160.4-201ENST00000596971 382 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 RPL7P50-201ENST00000600588 727 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AC140113.4-201ENST00000622087 222 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 AC002044.3-201ENST00000623314 541 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF1Q12946 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 MTCO1P46-201ENST00000451639 1491 ntBASIC4.04□□□□□ -1.76
FOXF1Q12946 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
FOXF1Q12946 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
FOXF1Q12946 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 MFSD8-242ENST00000641690 4199 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 RPS20P14-201ENST00000412545 360 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXF1Q12946 TMSB10P2-201ENST00000416049 131 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC062016.2-201ENST00000420950 676 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 ARAFP1-201ENST00000422172 605 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 CDY14P-201ENST00000431260 1014 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXF1Q12946 CDY12P-201ENST00000440679 1015 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 CDY13P-201ENST00000445813 1015 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXF1Q12946 CDY23P-201ENST00000451661 1014 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXF1Q12946 DDX39BP2-208ENST00000453923 258 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.03□□□□□ -1.76
FOXF1Q12946 RPL5P16-201ENST00000471467 790 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXF1Q12946 AP000827.1-201ENST00000527814 258 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXF1Q12946 ATP5J2P6-201ENST00000565203 266 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms