Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 AL359219.2-201ENST00000555184 348 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 AC091979.2-201ENST00000607514 214 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNA1P78396 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCNA1P78396 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.34□□□□□ -1.55
CCNA1P78396 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNA1P78396 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
CCNA1P78396 RN7SKP263-201ENST00000411194 309 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AC011998.1-201ENST00000433403 117 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNA1P78396 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNA1P78396 AL133244.1-201ENST00000456007 258 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 CYCSP34-201ENST00000458172 304 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AC020898.1-201ENST00000474167 787 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCNA1P78396 MORF4L2P1-201ENST00000503761 858 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AP000827.1-201ENST00000527814 258 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNA1P78396 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AC007224.1-201ENST00000564410 144 ntBASIC5.34□□□□□ -1.55
CCNA1P78396 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.34□□□□□ -1.55
CCNA1P78396 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNA1P78396 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.34□□□□□ -1.55
CCNA1P78396 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCNA1P78396 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCNA1P78396 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCNA1P78396 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCNA1P78396 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCNA1P78396 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 BMS1P3-201ENST00000372011 932 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 SNORA57.1-201ENST00000391227 145 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 RPL5P19-201ENST00000404228 893 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNA1P78396 VN1R37P-201ENST00000419096 748 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC012519.1-201ENST00000424588 610 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 HMGN2P27-201ENST00000427352 270 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC022431.1-201ENST00000450941 438 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 RN7SL810P-201ENST00000493031 276 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 IGLVIV-65-201ENST00000517313 360 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC105031.1-201ENST00000518550 476 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC069366.1-201ENST00000583159 838 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC010857.1-201ENST00000606398 594 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNA1P78396 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNA1P78396 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNA1P78396 AC005332.5-201ENST00000591222 2919 ntBASIC5.33□□□□□ -1.56
CCNA1P78396 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCNA1P78396 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNA1P78396 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNA1P78396 HSPA8P17-201ENST00000427029 1382 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNA1P78396 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 AL121950.1-201ENST00000624993 2077 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 SNORA70C-201ENST00000384538 135 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 MT-RNR1-201ENST00000389680 954 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNA1P78396 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 RN7SKP27-201ENST00000410684 333 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 OR51B3P-201ENST00000412287 913 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms