Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.42□□□□□ -1.7
RPS4XP62701 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.42□□□□□ -1.7
RPS4XP62701 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.42□□□□□ -1.7
RPS4XP62701 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.42□□□□□ -1.7
RPS4XP62701 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RPS4XP62701 AC012618.3-205ENST00000637896 1496 ntBASIC4.42□□□□□ -1.7
RPS4XP62701 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
RPS4XP62701 SMG1P4-204ENST00000523028 4131 ntBASIC4.42□□□□□ -1.7
RPS4XP62701 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPS4XP62701 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.41□□□□□ -1.7
RPS4XP62701 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 AC024341.1-201ENST00000526444 1552 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.41□□□□□ -1.7
RPS4XP62701 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 UBBP2-201ENST00000376781 231 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 RNA5SP345-201ENST00000410646 108 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 RN7SKP222-201ENST00000410651 315 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 CHEK2P3-201ENST00000416118 248 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 VN1R37P-201ENST00000419096 748 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 RGS17P1-201ENST00000423358 553 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 USP9YP9-201ENST00000429406 715 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.41□□□□□ -1.7
RPS4XP62701 NMNAT1P2-201ENST00000435192 860 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.41□□□□□ -1.7
RPS4XP62701 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 CYCSP34-201ENST00000458172 304 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 TPT1P1-201ENST00000458495 518 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.41□□□□□ -1.7
RPS4XP62701 AC140172.1-201ENST00000502928 141 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 RNA5SP392-201ENST00000516905 112 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AC068993.1-201ENST00000546724 589 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
RPS4XP62701 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.41□□□□□ -1.7
RPS4XP62701 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AC022106.2-201ENST00000620114 757 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 AC019206.1-201ENST00000621938 425 ntBASIC4.41□□□□□ -1.7
RPS4XP62701 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.41□□□□□ -1.7
RPS4XP62701 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.41□□□□□ -1.7
RPS4XP62701 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPS4XP62701 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPS4XP62701 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.41□□□□□ -1.7
RPS4XP62701 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
RPS4XP62701 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.4□□□□□ -1.7
RPS4XP62701 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 AL359715.4-201ENST00000606629 1436 ntBASIC4.4□□□□□ -1.7
RPS4XP62701 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RPS4XP62701 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPS4XP62701 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.4□□□□□ -1.7
RPS4XP62701 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 SNORA56-201ENST00000383966 129 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 RNU6-225P-201ENST00000384613 103 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPS4XP62701 AL357515.1-201ENST00000402967 542 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 RPS4XP9-201ENST00000405151 780 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AP002530.1-201ENST00000405705 684 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 USP9YP19-201ENST00000412165 485 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 AL807761.1-201ENST00000417622 171 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AF186996.5-201ENST00000418098 904 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 EIF4A1P1-201ENST00000420241 934 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 OR2AM1P-201ENST00000422137 422 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AC245028.1-201ENST00000423259 256 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC007000.2-201ENST00000442564 487 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 CEACAMP9-201ENST00000442990 513 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 TPT1P13-201ENST00000449760 499 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AL445433.1-201ENST00000457507 257 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC073358.1-201ENST00000505671 684 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 HIGD1AP18-201ENST00000520730 278 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms