Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPS27AP16-201ENST00000492222 470 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 AC018442.3-201ENST00000523025 183 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN6P56747 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN6P56747 AC093591.2-201ENST00000565254 3843 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 AC090948.2-201ENST00000607363 564 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 AC012409.3-201ENST00000611343 981 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 AP000648.2-201ENST00000624182 404 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN6P56747 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN6P56747 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 AC007382.1-201ENST00000624376 2618 ntBASIC4.52□□□□□ -1.69
CLDN6P56747 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN6P56747 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN6P56747 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 AC096644.3-201ENST00000416788 338 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AL389915.1-201ENST00000422463 466 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 OR4C10P-201ENST00000434991 931 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 AC108463.1-201ENST00000450258 347 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 RPS4XP12-201ENST00000461747 709 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AC034236.1-201ENST00000469891 373 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN6P56747 AC073073.1-201ENST00000493920 463 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 RN7SL558P-201ENST00000497468 299 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 FTH1P11-201ENST00000517577 551 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AL133338.2-201ENST00000604292 736 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AC115286.1-201ENST00000604298 434 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AC073137.1-201ENST00000605636 634 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 AC018695.5-201ENST00000605872 315 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 AL133243.1-201ENST00000614487 366 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN6P56747 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 SOCS5P3-201ENST00000425115 1576 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN6P56747 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLDN6P56747 OR14L1P-202ENST00000641545 3009 ntBASIC4.51□□□□□ -1.69
CLDN6P56747 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN6P56747 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN6P56747 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN6P56747 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 RLIMP2-201ENST00000427891 1563 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC009643.2-201ENST00000603543 1448 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 AC021146.4-201ENST00000309229 279 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
CLDN6P56747 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN6P56747 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 EI24P3-201ENST00000399046 1062 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 RAB9AP4-201ENST00000415230 609 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN6P56747 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN6P56747 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN6P56747 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC017007.3-201ENST00000479865 435 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN6P56747 RNU1-6P-201ENST00000516290 144 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 RNU6-709P-201ENST00000517257 104 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN6P56747 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms