Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 AC093765.1-201ENST00000603758 881 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC092354.1-201ENST00000606057 376 ntBASIC6.4□□□□□ -1.38
PMS1P54277 MIR6889-201ENST00000613185 59 ntBASIC6.4□□□□□ -1.38
PMS1P54277 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC005840.5-201ENST00000619166 599 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC135068.5-201ENST00000624197 983 ntBASIC6.4□□□□□ -1.38
PMS1P54277 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PMS1P54277 DCAF13P3-201ENST00000561147 1334 ntBASIC6.4□□□□□ -1.39
PMS1P54277 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.4□□□□□ -1.39
PMS1P54277 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.4□□□□□ -1.39
PMS1P54277 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.4□□□□□ -1.39
PMS1P54277 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PMS1P54277 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PMS1P54277 AC093225.1-201ENST00000506867 1408 ntBASIC6.4□□□□□ -1.39
PMS1P54277 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.4□□□□□ -1.39
PMS1P54277 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PMS1P54277 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PMS1P54277 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PMS1P54277 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PMS1P54277 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.4□□□□□ -1.39
PMS1P54277 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PMS1P54277 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.4□□□□□ -1.39
PMS1P54277 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PMS1P54277 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 Y_RNA.516-201ENST00000384541 124 ntBASIC6.39□□□□□ -1.39
PMS1P54277 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PMS1P54277 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC007899.1-201ENST00000412776 775 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 MTND1P23-201ENST00000416931 372 ntBASIC6.39□□□□□ -1.39
PMS1P54277 PTP4A1P1-201ENST00000420539 515 ntBASIC6.39□□□□□ -1.39
PMS1P54277 RNGTTP1-201ENST00000420965 728 ntBASIC6.39□□□□□ -1.39
PMS1P54277 GAPDHP49-201ENST00000421421 961 ntBASIC6.39□□□□□ -1.39
PMS1P54277 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 AL590399.4-201ENST00000436561 601 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC093155.1-201ENST00000440164 826 ntBASIC6.39□□□□□ -1.39
PMS1P54277 ATP5LP2-201ENST00000440646 311 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 RPS23P9-201ENST00000448848 438 ntBASIC6.39□□□□□ -1.39
PMS1P54277 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 AC105384.2-201ENST00000508433 640 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 AL139174.1-201ENST00000531489 886 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC084121.1-201ENST00000533882 835 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 RPA2P1-201ENST00000556557 721 ntBASIC6.39□□□□□ -1.39
PMS1P54277 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
PMS1P54277 MIR4420-201ENST00000583944 77 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC008507.1-201ENST00000587506 734 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AL136131.3-201ENST00000607600 188 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AP001437.1-201ENST00000608783 456 ntBASIC6.39□□□□□ -1.39
PMS1P54277 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.39□□□□□ -1.39
PMS1P54277 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.39□□□□□ -1.39
PMS1P54277 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 AP000550.3-201ENST00000637734 379 ntBASIC6.39□□□□□ -1.39
PMS1P54277 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PMS1P54277 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PMS1P54277 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 AC123769.1-201ENST00000530992 3192 ntBASIC6.39□□□□□ -1.39
PMS1P54277 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.39□□□□□ -1.39
PMS1P54277 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PMS1P54277 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.39□□□□□ -1.39
PMS1P54277 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PMS1P54277 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms