Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU1-6P-201ENST00000516290 144 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.11□□□□□ -1.75
SRP9P49458 BUD31P1-201ENST00000521828 359 ntBASIC4.11□□□□□ -1.75
SRP9P49458 OR5D15P-201ENST00000531671 942 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.11□□□□□ -1.75
SRP9P49458 GCSHP4-201ENST00000538792 439 ntBASIC4.11□□□□□ -1.75
SRP9P49458 FKBP1BP1-201ENST00000553366 325 ntBASIC4.11□□□□□ -1.75
SRP9P49458 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.11□□□□□ -1.75
SRP9P49458 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.11□□□□□ -1.75
SRP9P49458 AL049839.1-201ENST00000556151 657 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AC009117.1-201ENST00000563948 554 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.11□□□□□ -1.75
SRP9P49458 MIR3667-201ENST00000581025 74 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AC007497.1-201ENST00000610421 561 ntBASIC4.11□□□□□ -1.75
SRP9P49458 AL445528.2-201ENST00000620582 470 ntBASIC4.11□□□□□ -1.75
SRP9P49458 MIR6730-201ENST00000622213 67 ntBASIC4.11□□□□□ -1.75
SRP9P49458 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SRP9P49458 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SRP9P49458 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.11□□□□□ -1.75
SRP9P49458 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.11□□□□□ -1.75
SRP9P49458 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.1□□□□□ -1.75
SRP9P49458 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.1□□□□□ -1.75
SRP9P49458 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SRP9P49458 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SRP9P49458 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SRP9P49458 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SRP9P49458 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SRP9P49458 OR56B2P-201ENST00000317102 954 ntBASIC4.1□□□□□ -1.75
SRP9P49458 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SRP9P49458 RNU1-108P-201ENST00000362556 161 ntBASIC4.1□□□□□ -1.75
SRP9P49458 MIR921-201ENST00000401133 56 ntBASIC4.1□□□□□ -1.75
SRP9P49458 ARL4AP5-201ENST00000404372 599 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
SRP9P49458 VDAC1P9-201ENST00000412766 841 ntBASIC4.1□□□□□ -1.75
SRP9P49458 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SRP9P49458 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.1□□□□□ -1.75
SRP9P49458 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.1□□□□□ -1.75
SRP9P49458 HSPE1P22-201ENST00000456856 327 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SRP9P49458 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SRP9P49458 AC133555.2-201ENST00000550213 292 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC015912.2-201ENST00000571053 181 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC027455.1-201ENST00000574104 594 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC007448.1-201ENST00000582714 234 ntBASIC4.1□□□□□ -1.75
SRP9P49458 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SRP9P49458 FAM27B-201ENST00000610601 213 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AL049539.1-201ENST00000611964 459 ntBASIC4.1□□□□□ -1.75
SRP9P49458 MIR7154-201ENST00000620673 73 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC067852.7-201ENST00000623270 535 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AC011815.3-201ENST00000624194 473 ntBASIC4.1□□□□□ -1.75
SRP9P49458 AL136164.3-201ENST00000624429 3978 ntBASIC4.1□□□□□ -1.75
SRP9P49458 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SRP9P49458 NCLP2-201ENST00000416078 1462 ntBASIC4.1□□□□□ -1.75
SRP9P49458 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SRP9P49458 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.09□□□□□ -1.75
SRP9P49458 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 RNA5SP502-201ENST00000362694 119 ntBASIC4.09□□□□□ -1.75
SRP9P49458 RN7SKP103-201ENST00000363848 320 ntBASIC4.09□□□□□ -1.75
SRP9P49458 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 VN1R37P-201ENST00000419096 748 ntBASIC4.09□□□□□ -1.75
SRP9P49458 LINC00993-201ENST00000420453 540 ntBASIC4.09□□□□□ -1.75
SRP9P49458 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
SRP9P49458 AC104837.2-201ENST00000427236 424 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 PA2G4P6-201ENST00000438325 1197 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC006466.1-201ENST00000438721 289 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC104651.2-201ENST00000447549 528 ntBASIC4.09□□□□□ -1.75
SRP9P49458 NDUFS5P3-201ENST00000450668 321 ntBASIC4.09□□□□□ -1.75
SRP9P49458 RPS3AP53-201ENST00000454716 778 ntBASIC4.09□□□□□ -1.75
SRP9P49458 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SRP9P49458 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 AC100770.1-201ENST00000532310 322 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.09□□□□□ -1.75
SRP9P49458 MTND6P33-201ENST00000571794 183 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AL121834.1-201ENST00000572284 509 ntBASIC4.09□□□□□ -1.75
SRP9P49458 MIR4436B2-201ENST00000581415 91 ntBASIC4.09□□□□□ -1.75
SRP9P49458 MIR4436B1-201ENST00000583272 91 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC022726.1-201ENST00000587475 207 ntBASIC4.09□□□□□ -1.75
SRP9P49458 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.09□□□□□ -1.75
SRP9P49458 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.09□□□□□ -1.75
SRP9P49458 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
SRP9P49458 AL512782.1-201ENST00000603093 364 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AL031320.1-201ENST00000604177 357 ntBASIC4.09□□□□□ -1.75
SRP9P49458 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms