Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MSX2P35548 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AP005901.5-201ENST00000545779 1796 ntBASIC5.52□□□□□ -1.53
MSX2P35548 UGT2B26P-201ENST00000508672 1613 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC005005.4-201ENST00000623789 16698 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.52□□□□□ -1.53
MSX2P35548 AC068870.1-201ENST00000563737 2455 ntBASIC5.52□□□□□ -1.53
MSX2P35548 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AC093719.1-202ENST00000392735 373 ntBASIC5.52□□□□□ -1.53
MSX2P35548 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AC007899.1-201ENST00000412776 775 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC079809.1-201ENST00000415468 276 ntBASIC5.52□□□□□ -1.53
MSX2P35548 FAM183DP-201ENST00000421987 399 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AL022400.1-201ENST00000423946 935 ntBASIC5.52□□□□□ -1.53
MSX2P35548 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 VTI1BP4-201ENST00000427516 527 ntBASIC5.52□□□□□ -1.53
MSX2P35548 RPL23AP4-201ENST00000427757 463 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 ATP5F1P1-201ENST00000433775 569 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.52□□□□□ -1.53
MSX2P35548 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AL035407.2-201ENST00000454090 378 ntBASIC5.52□□□□□ -1.53
MSX2P35548 CFTRP1-201ENST00000456646 183 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 RPL7P18-201ENST00000478965 734 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC109486.1-201ENST00000486833 374 ntBASIC5.52□□□□□ -1.53
MSX2P35548 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AC073358.1-201ENST00000505671 684 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 MINOS1P4-201ENST00000515470 318 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.52□□□□□ -1.53
MSX2P35548 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 CYCSP25-201ENST00000525280 316 ntBASIC5.52□□□□□ -1.53
MSX2P35548 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AC087883.1-201ENST00000551882 391 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 AC007954.1-201ENST00000554198 494 ntBASIC5.52□□□□□ -1.53
MSX2P35548 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 TXNP4-201ENST00000575018 310 ntBASIC5.52□□□□□ -1.53
MSX2P35548 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 MIR3912-201ENST00000577566 105 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 AL606834.2-201ENST00000602954 668 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 AP001823.1-201ENST00000604056 1003 ntBASIC5.52□□□□□ -1.53
MSX2P35548 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
MSX2P35548 AF250324.2-201ENST00000608299 610 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC024941.1-201ENST00000612250 334 ntBASIC5.52□□□□□ -1.53
MSX2P35548 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.52□□□□□ -1.53
MSX2P35548 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 AC007603.3-201ENST00000636915 979 ntBASIC5.52□□□□□ -1.53
MSX2P35548 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AL022311.1-201ENST00000623726 19416 ntBASIC5.52□□□□□ -1.53
MSX2P35548 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.52□□□□□ -1.53
MSX2P35548 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.52□□□□□ -1.53
MSX2P35548 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MSX2P35548 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSX2P35548 AC138393.1-206ENST00000540997 1886 ntBASIC5.51□□□□□ -1.53
MSX2P35548 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
MSX2P35548 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSX2P35548 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.51□□□□□ -1.53
MSX2P35548 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSX2P35548 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.51□□□□□ -1.53
MSX2P35548 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MSX2P35548 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms