Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC027308.1-201ENST00000517993 110 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.99□□□□□ -1.45
SMARCA1P28370 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AP002373.2-201ENST00000541631 1060 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 OR11J2P-201ENST00000555298 907 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA1P28370 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.99□□□□□ -1.45
SMARCA1P28370 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.99□□□□□ -1.45
SMARCA1P28370 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AP005432.2-201ENST00000608162 586 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 AC006840.1-201ENST00000623069 542 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 AC120349.3-201ENST00000624377 529 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.99□□□□□ -1.45
SMARCA1P28370 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA1P28370 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA1P28370 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA1P28370 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA1P28370 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA1P28370 RBPJP2-201ENST00000618187 1444 ntBASIC5.99□□□□□ -1.45
SMARCA1P28370 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SMARCA1P28370 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA1P28370 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 NXF4-202ENST00000416098 1465 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AL606537.1-201ENST00000607258 2011 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC017007.4-201ENST00000503353 1352 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 CASC19-221ENST00000641309 1382 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 RN7SKP126-201ENST00000411143 300 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 BRWD1P3-201ENST00000428816 390 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA1P28370 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AURKAPS1-201ENST00000451805 1212 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC092155.2-201ENST00000454675 477 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC109462.1-201ENST00000491087 368 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA1P28370 MTND4LP2-201ENST00000502312 285 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 AL049870.4-201ENST00000555741 486 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMARCA1P28370 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 GAS5-AS1-201ENST00000602767 694 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA1P28370 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC011330.2-201ENST00000621680 635 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC018445.2-201ENST00000622987 260 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC138965.3-201ENST00000623875 498 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 AC009039.2-201ENST00000624524 529 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA1P28370 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC027228.2-201ENST00000567141 2154 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA1P28370 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA1P28370 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMARCA1P28370 AC109780.1-201ENST00000451768 1344 ntBASIC5.98□□□□□ -1.45
SMARCA1P28370 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA1P28370 HSPA8P18-201ENST00000439846 1928 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA1P28370 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA1P28370 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA1P28370 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMARCA1P28370 RNA5SP305-201ENST00000362665 119 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMARCA1P28370 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMARCA1P28370 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA1P28370 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA1P28370 DPPA2P3-201ENST00000411853 655 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 COX5BP7-201ENST00000414780 274 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 RPL23AP27-201ENST00000415161 451 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 MTCO2P21-201ENST00000419780 677 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA1P28370 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA1P28370 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA1P28370 VN1R25P-201ENST00000443385 738 ntBASIC5.97□□□□□ -1.45
SMARCA1P28370 Z73417.1-201ENST00000447373 778 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms