Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ZNF603P-201ENST00000405613 487 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 RNA5SP345-201ENST00000410646 108 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AF186996.5-201ENST00000418098 904 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 OR6K4P-201ENST00000423179 955 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 RPS17P8-201ENST00000434525 335 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 HMGN1P2-201ENST00000445197 310 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 NDUFS5P3-201ENST00000450668 321 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC069277.2-201ENST00000454211 432 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 YRDCP3-201ENST00000456507 480 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC116562.1-201ENST00000485355 781 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 RN7SL184P-201ENST00000488308 297 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 RN7SL244P-201ENST00000493405 297 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 RNA5SP43-201ENST00000516559 110 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 OR4A46P-201ENST00000527255 933 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AP006289.1-201ENST00000538089 277 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AL360157.1-201ENST00000565962 87 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AP000919.1-201ENST00000582850 985 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC034236.3-201ENST00000605999 461 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 MIR6780B-201ENST00000610307 79 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC078899.5-201ENST00000612475 178 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AL627171.1-201ENST00000618845 1308 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 RN7SKP187-201ENST00000365536 330 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 RNA5SP151-201ENST00000365632 117 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 RPL21P43-201ENST00000425440 472 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 RPL23AP19-201ENST00000436229 369 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 RPL34P20-201ENST00000442771 351 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AP000281.1-201ENST00000444036 316 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 SUMO2P1-206ENST00000445436 284 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC092647.2-201ENST00000452998 253 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC105918.1-201ENST00000474399 838 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 RN7SL97P-201ENST00000486780 299 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 HMGN2P25-201ENST00000486956 268 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 COX6B1P5-201ENST00000509843 249 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 OR7E128P-201ENST00000532736 1024 ntBASIC4.01□□□□□ -1.77
HLA-DMAP28067 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMAP28067 AC091178.1-203ENST00000584586 279 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms