Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC090502.2-201ENST00000549267 280 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.39□□□□□ -1.55
CD40P25942 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 SULT1C2P2-201ENST00000562517 294 ntBASIC5.39□□□□□ -1.55
CD40P25942 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 AC008507.3-201ENST00000585753 472 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC012065.4-201ENST00000602445 679 ntBASIC5.39□□□□□ -1.55
CD40P25942 PSMA6P4-201ENST00000603247 718 ntBASIC5.39□□□□□ -1.55
CD40P25942 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 RNU6-88P-201ENST00000606801 100 ntBASIC5.39□□□□□ -1.55
CD40P25942 AL591167.1-201ENST00000607321 456 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC108747.1-201ENST00000609508 535 ntBASIC5.39□□□□□ -1.55
CD40P25942 AL136097.3-201ENST00000611097 505 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC008498.1-201ENST00000613012 531 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC024255.1-201ENST00000614376 102 ntBASIC5.39□□□□□ -1.55
CD40P25942 RFPL4AP6-201ENST00000616792 846 ntBASIC5.39□□□□□ -1.55
CD40P25942 MIR6861-201ENST00000618657 64 ntBASIC5.39□□□□□ -1.55
CD40P25942 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.39□□□□□ -1.55
CD40P25942 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 AC241584.2-201ENST00000637142 2090 ntBASIC5.39□□□□□ -1.55
CD40P25942 AC007342.5-201ENST00000571340 2142 ntBASIC5.39□□□□□ -1.55
CD40P25942 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 MTND4P16-201ENST00000466108 1367 ntBASIC5.39□□□□□ -1.55
CD40P25942 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.39□□□□□ -1.55
CD40P25942 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.39□□□□□ -1.55
CD40P25942 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD40P25942 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 AC092079.1-201ENST00000558620 1985 ntBASIC5.38□□□□□ -1.55
CD40P25942 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 AC103591.2-201ENST00000265259 766 ntBASIC5.38□□□□□ -1.55
CD40P25942 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 SNORA21-201ENST00000362423 132 ntBASIC5.38□□□□□ -1.55
CD40P25942 RNA5SP110-201ENST00000362638 115 ntBASIC5.38□□□□□ -1.55
CD40P25942 RN7SKP275-201ENST00000364626 301 ntBASIC5.38□□□□□ -1.55
CD40P25942 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CD40P25942 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 AL512430.2-201ENST00000406786 339 ntBASIC5.38□□□□□ -1.55
CD40P25942 SNORA11.3-201ENST00000408471 128 ntBASIC5.38□□□□□ -1.55
CD40P25942 RNA5SP156-201ENST00000410250 110 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 UBTFL3-201ENST00000418934 1024 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 NPM1P24-201ENST00000428039 894 ntBASIC5.38□□□□□ -1.55
CD40P25942 RPL7P56-201ENST00000429441 717 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 VDAC1P6-201ENST00000430062 855 ntBASIC5.38□□□□□ -1.55
CD40P25942 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 MTND1P4-201ENST00000435196 415 ntBASIC5.38□□□□□ -1.55
CD40P25942 MTND1P28-201ENST00000435623 950 ntBASIC5.38□□□□□ -1.55
CD40P25942 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 NDUFS5P5-201ENST00000437256 321 ntBASIC5.38□□□□□ -1.55
CD40P25942 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 AC092967.1-201ENST00000449016 481 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC002553.3-201ENST00000453002 341 ntBASIC5.38□□□□□ -1.55
CD40P25942 SSXP1-201ENST00000453640 473 ntBASIC5.38□□□□□ -1.55
CD40P25942 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 AC098847.1-201ENST00000473094 348 ntBASIC5.38□□□□□ -1.55
CD40P25942 UBTFL6-201ENST00000477929 1024 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 KRT19P6-201ENST00000510983 209 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC116347.2-201ENST00000514912 523 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 DUXAP2-201ENST00000519198 589 ntBASIC5.38□□□□□ -1.55
CD40P25942 IGKV3D-25-201ENST00000519599 235 ntBASIC5.38□□□□□ -1.55
CD40P25942 ARL2BPP5-201ENST00000523141 481 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.38□□□□□ -1.55
CD40P25942 CYCSP38-201ENST00000559840 322 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CD40P25942 AP001004.1-201ENST00000582468 324 ntBASIC5.38□□□□□ -1.55
CD40P25942 MIR4310-201ENST00000582950 57 ntBASIC5.38□□□□□ -1.55
CD40P25942 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.38□□□□□ -1.55
CD40P25942 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.38□□□□□ -1.55
CD40P25942 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.38□□□□□ -1.55
CD40P25942 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.38□□□□□ -1.55
CD40P25942 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.38□□□□□ -1.55
CD40P25942 AL138895.2-201ENST00000603019 178 ntBASIC5.38□□□□□ -1.55
CD40P25942 TAS2R6P-201ENST00000605022 826 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL513218.1-201ENST00000606527 391 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms