Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 RAD17P1-201ENST00000418130 2042 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 TCP11X1-202ENST00000622971 1372 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 RN7SKP280-201ENST00000364196 304 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PDGFBP01127 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 MTND3P20-201ENST00000407663 186 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 AC114755.2-201ENST00000413520 361 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 HYALP1-201ENST00000417674 1279 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 NDUFB4P8-201ENST00000435351 367 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 NUTF2P3-201ENST00000448540 384 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 RPL23AP24-201ENST00000458203 385 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFBP01127 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 OR10D4P-201ENST00000525892 951 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFBP01127 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC074029.2-201ENST00000551045 634 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 AP001357.1-201ENST00000586304 1053 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC022726.1-201ENST00000587475 207 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC019206.1-201ENST00000621938 425 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 CR381572.2-201ENST00000624852 397 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 CYP1D1P-201ENST00000416662 1433 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 AL445437.1-201ENST00000623157 3087 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFBP01127 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFBP01127 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.94□□□□□ -1.62
PDGFBP01127 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 RNA5SP453-201ENST00000362503 119 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 SNORA68.2-201ENST00000391263 128 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFBP01127 AL512504.1-201ENST00000415494 778 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 AL354766.1-201ENST00000423396 542 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFBP01127 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.93□□□□□ -1.62
PDGFBP01127 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFBP01127 CLIC4P1-201ENST00000453177 535 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFBP01127 RN7SL814P-201ENST00000487715 300 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 ECM1P2-201ENST00000503354 1577 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 AC021146.7-201ENST00000509604 775 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 RNU6-491P-201ENST00000516099 110 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 AC023632.4-201ENST00000517783 191 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.93□□□□□ -1.62
PDGFBP01127 OR8A2P-201ENST00000528631 952 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 SMG1P6-201ENST00000532337 2930 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 AC008782.1-201ENST00000603386 430 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms