Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 RNA5SP191-201ENST00000362585 102 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 RN7SKP149-201ENST00000363008 344 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 RNU6-618P-201ENST00000363518 112 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 SNORD96B-201ENST00000386148 79 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 RNA5SP113-201ENST00000410486 84 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 RPL21P43-201ENST00000425440 472 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 AC097523.2-201ENST00000435551 652 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 CYCSP11-201ENST00000436426 315 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC087888.1-201ENST00000550884 1254 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 SULT1C2P2-201ENST00000562517 294 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN9O95484 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 AC133644.2-201ENST00000608142 540 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AF117829.2-201ENST00000619538 361 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AC140113.4-201ENST00000622087 222 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AC004232.3-201ENST00000622977 525 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 AP003499.2-201ENST00000624100 483 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN9O95484 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN9O95484 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 HSPD1P14-201ENST00000432666 1618 ntBASIC4.5□□□□□ -1.69
CLDN9O95484 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN9O95484 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN9O95484 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN9O95484 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CLDN9O95484 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 MT-TP-201ENST00000387461 68 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 Z98745.1-201ENST00000402553 494 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 RSU1P3-201ENST00000412878 835 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AJ239321.1-201ENST00000424255 564 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 MTND2P2-201ENST00000434633 945 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 PA2G4P6-201ENST00000438325 1197 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AL157884.3-201ENST00000448273 1184 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN9O95484 AC063943.1-201ENST00000465434 453 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 ATG10-AS1-201ENST00000504846 648 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 OR8X1P-201ENST00000534542 869 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 TRAV11-201ENST00000539512 339 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN9O95484 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN9O95484 AC084759.1-201ENST00000561168 290 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 ATP5J2P6-201ENST00000565203 266 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN9O95484 MIR4646-201ENST00000580775 63 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN9O95484 AL512782.1-201ENST00000603093 364 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AC087385.3-201ENST00000620477 187 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 AC005086.4-201ENST00000623065 213 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 AC110792.3-201ENST00000595906 1614 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN9O95484 AC000123.3-201ENST00000624029 4975 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN9O95484 NEAT1-202ENST00000501122 22743 ntBASIC4.49□□□□□ -1.69
CLDN9O95484 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN9O95484 LINC01355-201ENST00000566551 5444 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AC108751.5-201ENST00000492880 1336 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 EOGT-210ENST00000615922 1931 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms