Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ZNF137P-201ENST00000456718 1920 ntBASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NEDD8-MDP1E9PL57 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 OR51C1P-202ENST00000641159 1444 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC139713.2-214ENST00000642059 1811 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL592148.3-201ENST00000608771 2646 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 DDX18P5-201ENST00000534547 1306 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 OR10AB1P-202ENST00000641219 1686 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL589826.1-201ENST00000340697 249 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 SNORA62-201ENST00000365493 153 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR7-1-201ENST00000384871 110 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR129-1-201ENST00000384972 72 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL590762.2-201ENST00000395798 571 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 RN7SKP97-201ENST00000410966 333 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 P2RY10P2-201ENST00000416730 913 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC013470.3-201ENST00000420252 1194 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 UQCRBP1-201ENST00000421129 336 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 RPS27AP7-201ENST00000422792 455 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 FAM204CP-201ENST00000424489 642 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 RPEP3-201ENST00000425462 676 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL589765.3-201ENST00000446084 462 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 TPT1P12-201ENST00000448968 492 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL513343.1-201ENST00000451818 792 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 TPRKBP1-201ENST00000456243 481 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AP000942.1-201ENST00000463969 747 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC104763.1-201ENST00000475274 360 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC022336.1-201ENST00000475510 337 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC013356.1-201ENST00000489027 564 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL36AP41-201ENST00000493820 306 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MTND2P31-201ENST00000512602 616 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AL049536.1-201ENST00000625043 744 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC087565.3-202ENST00000642085 1603 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC108467.2-201ENST00000617640 1597 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 AC120338.1-201ENST00000625074 1541 ntBASIC4.81□□□□□ -1.64
NEDD8-MDP1E9PL57 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 MIR365B-201ENST00000362317 111 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 Z98745.1-201ENST00000402553 494 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL512504.1-201ENST00000415494 778 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL356806.1-201ENST00000422524 916 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 SNRPFP2-201ENST00000440710 251 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC108463.1-201ENST00000450258 347 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC090142.1-201ENST00000465776 462 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 OR9N1P-201ENST00000491296 333 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 MTND4LP2-201ENST00000502312 285 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 FKBP1BP1-201ENST00000553366 325 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms