Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CDK11AQ9UQ88 ME2-216ENST00000639850 2331 ntTSL 5 BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 LINC01465-201ENST00000408887 1940 ntBASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDK11AQ9UQ88 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 AL671277.2-201ENST00000458060 996 ntBASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 KRT18P56-201ENST00000507275 550 ntBASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 AL023973.1-201ENST00000624619 620 ntBASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDK11AQ9UQ88 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 IER3-202ENST00000376377 1350 ntBASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 LINC00565-201ENST00000562710 2331 ntBASIC30.1■■■□□ 2.41
CDK11AQ9UQ88 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDK11AQ9UQ88 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 AP000523.1-201ENST00000398242 1049 ntBASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 AL359075.1-203ENST00000462729 1002 ntBASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 PRSS44-201ENST00000515154 1146 ntBASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 TOLLIP-AS1-201ENST00000530897 939 ntBASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
CDK11AQ9UQ88 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms