Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SH2D4AQ9H788 AC009237.14-201ENST00000609975 1594 ntBASIC22.71■■□□□ 1.23
SH2D4AQ9H788 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SH2D4AQ9H788 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SH2D4AQ9H788 FEM1AP1-201ENST00000431297 1995 ntBASIC22.7■■□□□ 1.23
SH2D4AQ9H788 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SH2D4AQ9H788 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SH2D4AQ9H788 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SH2D4AQ9H788 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 Z85996.1-201ENST00000494644 937 ntBASIC22.7■■□□□ 1.22
SH2D4AQ9H788 AL160286.2-201ENST00000567150 934 ntBASIC22.7■■□□□ 1.22
SH2D4AQ9H788 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 AC096733.2-201ENST00000609937 1394 ntBASIC22.7■■□□□ 1.22
SH2D4AQ9H788 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SH2D4AQ9H788 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 AL512408.1-201ENST00000569378 2000 ntBASIC22.69■■□□□ 1.22
SH2D4AQ9H788 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 GABARAPL3-202ENST00000624044 1851 ntBASIC22.69■■□□□ 1.22
SH2D4AQ9H788 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH2D4AQ9H788 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 MFAP1P1-201ENST00000442257 1255 ntBASIC22.68■■□□□ 1.22
SH2D4AQ9H788 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH2D4AQ9H788 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 LIN28AP1-201ENST00000429574 405 ntBASIC22.67■■□□□ 1.22
SH2D4AQ9H788 KRT18P57-201ENST00000443599 1254 ntBASIC22.67■■□□□ 1.22
SH2D4AQ9H788 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 AC008040.2-201ENST00000461049 708 ntBASIC22.67■■□□□ 1.22
SH2D4AQ9H788 AC091390.4-202ENST00000476426 537 ntBASIC22.67■■□□□ 1.22
SH2D4AQ9H788 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 AL049597.2-201ENST00000565575 961 ntBASIC22.67■■□□□ 1.22
SH2D4AQ9H788 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SH2D4AQ9H788 AL162377.1-201ENST00000618844 1793 ntBASIC22.66■■□□□ 1.22
SH2D4AQ9H788 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 AL590326.2-201ENST00000625139 305 ntBASIC22.66■■□□□ 1.22
SH2D4AQ9H788 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.66■■□□□ 1.22
SH2D4AQ9H788 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms