Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 YBX1P2-201ENST00000489612 999 ntBASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.29■■■□□ 2.44
FYCO1Q9BQS8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 AC092667.1-201ENST00000434301 2586 ntBASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 AK4P3-201ENST00000418260 669 ntBASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
FYCO1Q9BQS8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 AP003041.3-201ENST00000527151 707 ntBASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 AL391422.3-201ENST00000603791 2761 ntBASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
FYCO1Q9BQS8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
FYCO1Q9BQS8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
FYCO1Q9BQS8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.26■■■□□ 2.44
FYCO1Q9BQS8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.26■■■□□ 2.43
FYCO1Q9BQS8 ARMC10P1-201ENST00000313754 855 ntBASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 AC104417.2-201ENST00000562989 1793 ntBASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 BX664615.1-201ENST00000443558 458 ntBASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 AC141257.4-201ENST00000634557 245 ntBASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 AC136944.6-201ENST00000634818 245 ntBASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FYCO1Q9BQS8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
FYCO1Q9BQS8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
FYCO1Q9BQS8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
FYCO1Q9BQS8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
FYCO1Q9BQS8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
FYCO1Q9BQS8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FYCO1Q9BQS8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
FYCO1Q9BQS8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms