Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.14■□□□□ 0.34
VRK1Q99986 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VRK1Q99986 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.14■□□□□ 0.33
VRK1Q99986 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.14■□□□□ 0.33
VRK1Q99986 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.14■□□□□ 0.33
VRK1Q99986 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VRK1Q99986 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 AL162377.1-201ENST00000618844 1793 ntBASIC17.14■□□□□ 0.33
VRK1Q99986 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VRK1Q99986 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
VRK1Q99986 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK1Q99986 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 AL512408.1-201ENST00000569378 2000 ntBASIC17.13■□□□□ 0.33
VRK1Q99986 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.13■□□□□ 0.33
VRK1Q99986 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 AC008550.1-201ENST00000511500 884 ntBASIC17.13■□□□□ 0.33
VRK1Q99986 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK1Q99986 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 AL023875.1-201ENST00000640777 796 ntBASIC17.13■□□□□ 0.33
VRK1Q99986 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 AC099778.1-201ENST00000568593 1911 ntBASIC17.13■□□□□ 0.33
VRK1Q99986 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VRK1Q99986 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK1Q99986 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK1Q99986 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
VRK1Q99986 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VRK1Q99986 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK1Q99986 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms