Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
RAD9AQ99638 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.84■□□□□ 0.93
RAD9AQ99638 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.84■□□□□ 0.93
RAD9AQ99638 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.84■□□□□ 0.93
RAD9AQ99638 NEK4P2-201ENST00000580004 1012 ntBASIC20.84■□□□□ 0.93
RAD9AQ99638 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
RAD9AQ99638 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAD9AQ99638 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD9AQ99638 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD9AQ99638 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD9AQ99638 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.83■□□□□ 0.93
RAD9AQ99638 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
RAD9AQ99638 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD9AQ99638 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD9AQ99638 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAD9AQ99638 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RAD9AQ99638 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 STARP1-201ENST00000397973 869 ntBASIC20.83■□□□□ 0.93
RAD9AQ99638 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD9AQ99638 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.83■□□□□ 0.93
RAD9AQ99638 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD9AQ99638 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD9AQ99638 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD9AQ99638 AC083849.1-201ENST00000615227 514 ntBASIC20.83■□□□□ 0.93
RAD9AQ99638 HYMAI.1-201ENST00000620949 238 ntBASIC20.83■□□□□ 0.93
RAD9AQ99638 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.83■□□□□ 0.93
RAD9AQ99638 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RAD9AQ99638 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RAD9AQ99638 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD9AQ99638 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAD9AQ99638 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAD9AQ99638 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD9AQ99638 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD9AQ99638 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RAD9AQ99638 ATP5G2P1-201ENST00000433580 426 ntBASIC20.82■□□□□ 0.92
RAD9AQ99638 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.82■□□□□ 0.92
RAD9AQ99638 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RAD9AQ99638 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.82■□□□□ 0.92
RAD9AQ99638 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD9AQ99638 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAD9AQ99638 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 LINC01311-201ENST00000565162 1445 ntBASIC20.81■□□□□ 0.92
RAD9AQ99638 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RAD9AQ99638 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
RAD9AQ99638 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.81■□□□□ 0.92
RAD9AQ99638 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.81■□□□□ 0.92
RAD9AQ99638 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.81■□□□□ 0.92
RAD9AQ99638 KRT8P41-201ENST00000533985 1514 ntBASIC20.81■□□□□ 0.92
RAD9AQ99638 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.81■□□□□ 0.92
RAD9AQ99638 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAD9AQ99638 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAD9AQ99638 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAD9AQ99638 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD9AQ99638 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
RAD9AQ99638 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.8■□□□□ 0.92
RAD9AQ99638 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD9AQ99638 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.8■□□□□ 0.92
RAD9AQ99638 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 AC012313.10-201ENST00000623509 926 ntBASIC20.8■□□□□ 0.92
RAD9AQ99638 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.8■□□□□ 0.92
RAD9AQ99638 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RAD9AQ99638 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD9AQ99638 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.8■□□□□ 0.92
RAD9AQ99638 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD9AQ99638 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.8■□□□□ 0.92
RAD9AQ99638 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms