Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
S1PR3Q99500 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
S1PR3Q99500 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 BX323043.1-201ENST00000641006 1765 ntBASIC16.05■□□□□ 0.16
S1PR3Q99500 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.04■□□□□ 0.16
S1PR3Q99500 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
S1PR3Q99500 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.04■□□□□ 0.16
S1PR3Q99500 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.04■□□□□ 0.16
S1PR3Q99500 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.04■□□□□ 0.16
S1PR3Q99500 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
S1PR3Q99500 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
S1PR3Q99500 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
S1PR3Q99500 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.03■□□□□ 0.16
S1PR3Q99500 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.03■□□□□ 0.16
S1PR3Q99500 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.03■□□□□ 0.16
S1PR3Q99500 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.03■□□□□ 0.16
S1PR3Q99500 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
S1PR3Q99500 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.03■□□□□ 0.16
S1PR3Q99500 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.03■□□□□ 0.16
S1PR3Q99500 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.03■□□□□ 0.16
S1PR3Q99500 AC083880.1-201ENST00000608266 535 ntBASIC16.03■□□□□ 0.16
S1PR3Q99500 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
S1PR3Q99500 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
S1PR3Q99500 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S1PR3Q99500 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
S1PR3Q99500 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR3Q99500 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.02■□□□□ 0.16
S1PR3Q99500 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.02■□□□□ 0.16
S1PR3Q99500 AC092368.3-202ENST00000574180 1591 ntBASIC16.02■□□□□ 0.16
S1PR3Q99500 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.02■□□□□ 0.16
S1PR3Q99500 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.02■□□□□ 0.16
S1PR3Q99500 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.02■□□□□ 0.16
S1PR3Q99500 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.02■□□□□ 0.16
S1PR3Q99500 HLA-B-256ENST00000639848 1089 ntBASIC16.02■□□□□ 0.16
S1PR3Q99500 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
S1PR3Q99500 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR3Q99500 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR3Q99500 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
S1PR3Q99500 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
S1PR3Q99500 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR3Q99500 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR3Q99500 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
S1PR3Q99500 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR3Q99500 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR3Q99500 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
S1PR3Q99500 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.02■□□□□ 0.15
S1PR3Q99500 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms