Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.61■□□□□ 0.41
SPENQ96T58 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.61■□□□□ 0.41
SPENQ96T58 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.61■□□□□ 0.41
SPENQ96T58 AP003041.3-201ENST00000527151 707 ntBASIC17.61■□□□□ 0.41
SPENQ96T58 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SPENQ96T58 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPENQ96T58 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPENQ96T58 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.61■□□□□ 0.41
SPENQ96T58 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
SPENQ96T58 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.6■□□□□ 0.41
SPENQ96T58 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.6■□□□□ 0.41
SPENQ96T58 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.6■□□□□ 0.41
SPENQ96T58 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SPENQ96T58 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.6■□□□□ 0.41
SPENQ96T58 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.6■□□□□ 0.41
SPENQ96T58 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 AC007225.1-201ENST00000566331 1836 ntBASIC17.6■□□□□ 0.41
SPENQ96T58 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 HLA-G-202ENST00000376815 851 ntBASIC17.6■□□□□ 0.41
SPENQ96T58 HLA-G-203ENST00000376818 1127 ntBASIC17.6■□□□□ 0.41
SPENQ96T58 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.6■□□□□ 0.41
SPENQ96T58 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPENQ96T58 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SPENQ96T58 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
SPENQ96T58 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.59■□□□□ 0.41
SPENQ96T58 KRT8P41-201ENST00000533985 1514 ntBASIC17.59■□□□□ 0.41
SPENQ96T58 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
SPENQ96T58 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
SPENQ96T58 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 VENTXP5-201ENST00000523979 775 ntBASIC17.59■□□□□ 0.41
SPENQ96T58 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.59■□□□□ 0.41
SPENQ96T58 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.59■□□□□ 0.41
SPENQ96T58 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 PCDHAC2-203ENST00000615316 3011 ntBASIC17.59■□□□□ 0.41
SPENQ96T58 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.59■□□□□ 0.41
SPENQ96T58 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPENQ96T58 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.58■□□□□ 0.41
SPENQ96T58 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPENQ96T58 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.58■□□□□ 0.41
SPENQ96T58 GCSHP2-201ENST00000560971 527 ntBASIC17.58■□□□□ 0.41
SPENQ96T58 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.58■□□□□ 0.41
SPENQ96T58 AC011298.2-201ENST00000617989 482 ntBASIC17.58■□□□□ 0.41
SPENQ96T58 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.58■□□□□ 0.41
SPENQ96T58 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.58■□□□□ 0.41
SPENQ96T58 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPENQ96T58 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
SPENQ96T58 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPENQ96T58 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SPENQ96T58 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPENQ96T58 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.58■□□□□ 0.4
SPENQ96T58 MIR3180-1-201ENST00000580374 94 ntBASIC17.58■□□□□ 0.4
SPENQ96T58 MIR3180-3-201ENST00000584616 94 ntBASIC17.58■□□□□ 0.4
SPENQ96T58 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SPENQ96T58 NPAP1P7-201ENST00000613027 823 ntBASIC17.58■□□□□ 0.4
SPENQ96T58 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPENQ96T58 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.58■□□□□ 0.4
SPENQ96T58 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SPENQ96T58 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.58■□□□□ 0.4
SPENQ96T58 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPENQ96T58 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.58■□□□□ 0.4
SPENQ96T58 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.58■□□□□ 0.4
SPENQ96T58 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.58■□□□□ 0.4
SPENQ96T58 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPENQ96T58 AC073314.1-201ENST00000568729 2216 ntBASIC17.57■□□□□ 0.4
SPENQ96T58 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPENQ96T58 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPENQ96T58 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.57■□□□□ 0.4
SPENQ96T58 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPENQ96T58 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.57■□□□□ 0.4
SPENQ96T58 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPENQ96T58 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.57■□□□□ 0.4
SPENQ96T58 AP000523.1-201ENST00000398242 1049 ntBASIC17.57■□□□□ 0.4
SPENQ96T58 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.57■□□□□ 0.4
SPENQ96T58 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.57■□□□□ 0.4
SPENQ96T58 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.57■□□□□ 0.4
SPENQ96T58 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms